HMMER2.0 [2.3.2] NAME Group.Atypical.KD LENG 5 ALPH Amino RF no CS no MAP yes COM /opt/Bio/hmmer/bin/hmmbuild -f -n Group.Atypical.KD ./Group.Atypical.KD.hmm ./Group.Atypical.KD.aln COM /opt/Bio/hmmer/bin/hmmcalibrate ./Group.Atypical.KD.hmm NSEQ 251 DATE Mon Sep 20 15:11:13 2010 CKSUM 4714 XT -8455 -4 -1000 -1000 -8455 -4 -8455 -4 NULT -4 -8455 NULE 595 -1558 85 338 -294 453 -1158 197 249 902 -1085 -142 -21 -313 45 531 201 384 -1998 -644 EVD -6.954099 1.307523 HMM A C D E F G H I K L M N P Q R S T V W Y m->m m->i m->d i->m i->i d->m d->d b->m m->e -10 * -7161 1 -377 2782 -568 -857 999 -2324 394 -17 355 557 -1530 -1168 -1515 -312 -126 -1063 -682 -83 -893 1582 6713 - -149 -500 233 43 -381 399 106 -626 210 -466 -720 275 394 45 96 359 117 -369 -294 -249 - -190 -12508 -13550 -894 -1115 -701 -1378 -1010 -3020 2 -1775 -4929 68 -1976 -395 -5714 -4452 2277 -172 591 -391 1333 -317 -1676 -431 -604 -1923 347 -780 -318 6714 - -149 -500 233 43 -381 399 106 -626 210 -466 -720 275 394 45 96 359 117 -369 -294 -249 - -219 -12558 -13601 -894 -1115 -701 -1378 -3010 -2833 3 -1087 -897 369 307 -262 -1533 -664 -260 -49 136 -901 640 -639 1208 213 -144 -1154 -895 1234 1723 6715 - -149 -500 233 43 -381 399 106 -626 210 -466 -720 275 394 45 96 359 117 -369 -294 -249 - -257 -12617 -13659 -894 -1115 -701 -1378 -3010 -2619 4 -232 1210 1015 -1168 -366 -1233 -1021 940 536 19 278 1127 -2521 751 -112 -921 -1088 -1006 -666 373 6716 - -149 -500 233 43 -381 399 106 -626 210 -466 -720 275 394 45 96 359 117 -369 -294 -249 - -311 -12678 -13720 -894 -1115 -701 -1378 -3010 -2370 5 -1025 2505 295 -94 755 -1004 53 -224 299 316 338 1028 -824 97 355 -1675 -577 -1643 571 -837 6717 - * * * * * * * * * * * * * * * * * * * * - * * * * * * * -3010 0 //