HMMER2.0 [2.3.2] NAME Subfamily.Unique.protein LENG 7 ALPH Amino RF no CS no MAP yes COM /opt/Bio/hmmer/bin/hmmbuild -f -n Subfamily.Unique.protein ./Subfamily.Unique.protein.hmm ./Subfamily.Unique.protein.aln COM /opt/Bio/hmmer/bin/hmmcalibrate ./Subfamily.Unique.protein.hmm NSEQ 61 DATE Mon Sep 13 13:25:27 2010 CKSUM 1268 XT -8455 -4 -1000 -1000 -8455 -4 -8455 -4 NULT -4 -8455 NULE 595 -1558 85 338 -294 453 -1158 197 249 902 -1085 -142 -21 -313 45 531 201 384 -1998 -644 EVD -6.949189 1.569877 HMM A C D E F G H I K L M N P Q R S T V W Y m->m m->i m->d i->m i->i d->m d->d b->m m->e -23 * -5955 1 -172 -4629 1058 -163 -4946 -1963 1530 -879 -1180 430 -3719 -340 1121 -792 638 243 -137 305 288 -944 21899 - -149 -500 233 43 -381 399 106 -626 210 -466 -720 275 394 45 96 359 117 -369 -294 -249 - -126 -11221 -12263 -894 -1115 -701 -1378 -1023 -3595 2 97 820 -1258 217 -1299 -959 -2817 -797 219 391 -444 173 1106 438 681 -433 756 -924 -4779 -931 21900 - -149 -500 233 43 -381 399 106 -626 210 -466 -720 275 394 45 96 359 117 -369 -294 -249 - -137 -11231 -12273 -894 -1115 -701 -1378 -3608 -3469 3 -510 1807 -1372 -211 953 1010 1099 -694 261 -489 -3209 -3142 1086 -2723 672 -1688 -156 324 -4384 -861 21901 - -149 -500 233 43 -381 399 106 -626 210 -466 -720 275 394 45 96 359 117 -369 -294 -249 - -151 -11246 -12288 -894 -1115 -701 -1378 -3608 -3335 4 584 1389 367 437 -494 -449 -319 -784 243 249 336 -1055 -4274 -47 -1263 239 -179 540 -4714 -62 21902 - -149 -500 233 43 -381 399 106 -626 210 -466 -720 275 394 45 96 359 117 -369 -294 -249 - -169 -11264 -12306 -894 -1115 -701 -1378 -3608 -3186 5 -483 -125 307 -1259 1171 -966 -2863 -1802 -1215 23 -430 -330 357 339 -41 1597 253 -393 -4688 -948 21903 - -149 -500 233 43 -381 399 106 -626 210 -466 -720 275 394 45 96 359 117 -369 -294 -249 - -191 -11286 -12328 -894 -1115 -701 -1378 -3608 -3020 6 565 -4637 1417 201 -353 -4139 -428 -4708 -107 17 -3726 -306 -50 365 712 -424 -135 1082 -4820 -4138 21904 - -149 -500 233 43 -381 399 106 -626 210 -466 -720 275 394 45 96 359 117 -369 -294 -249 - -219 -11313 -12355 -894 -1115 -701 -1378 -3608 -2832 7 1339 1492 -5226 28 318 -1044 -3737 -80 -296 -84 507 -4355 -29 284 -1543 -159 -140 864 316 -913 21905 - * * * * * * * * * * * * * * * * * * * * - * * * * * * * -3608 0 //