Gene LRR3_d (S.moellendorffii)
LRR3_d
Species: S.moellendorffii
Alias: LRR3_d
External Links:
Annotation:
Sequence
Protein domains of LRR3_d.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.
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| Domain | Protein name | Domain Name | Range | Identity (%) | Significance | Score | Profile Source | Profile Range (length) | Alignment |
|---|---|---|---|---|---|---|---|---|---|
| LRRNT_2 | LRR3_d.AA | LRRNT_2 | 28-69 | 36 | 4.2e-15 | 51.98 | Pfam | 1-46 (46) | Show / Hide |
Range on Protein: 28-69 Range on HMM: 1-46/46 Sequence Identity: 36% (17 aa) LNSDGLSLVAFKRGIFS-DP-ERALSDWDESD--ATPCRWSGISCA .|.||..| ||| .. . || .||.|. |. ...|.|.|..| HNDDGQALLAFKSSLNDSDPHHGVLSSWNPSSSDSDCCSWTGVTCD |
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| LRR_1 | LRR3_d.AA | LRR_1 | 102-125 | 37 | 0.019743 | 12.79 | Pfam | 1-26 (26) | Show / Hide |
Range on Protein: 102-125 Range on HMM: 1-26/26 Sequence Identity: 37% (10 aa) YLEHLNLRQ-N--QLIGGLPPALFNAS |.||.|. | .| | .|| | . NLQHLDLSGCNCCNLTGHIPPSCF-NL |
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| LRR_1 | LRR3_d.AA | LRR_1 | 126-149 | 37 | 0.063543 | 10.99 | Pfam | 1-26 (26) | Show / Hide |
Range on Protein: 126-149 Range on HMM: 1-26/26 Sequence Identity: 37% (10 aa) ALQTLLLSD-N--DLSGPLPASICGTA ||.| ||. | |.| .| |.. NLQHLDLSGCNCCNLTGHIPPSCF-NL |
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| LRR_1 | LRR3_d.AA | LRR_1 | 151-173 | 35 | 0.015426 | 13.17 | Pfam | 1-26 (26) | Show / Hide |
Range on Protein: 151-173 Range on HMM: 1-26/26 Sequence Identity: 35% (10 aa) SLDTLDLSG-N--GFS-ATIPDS-IASC .| .||||| | .. ||.| . .. NLQHLDLSGCNCCNLTGH-IPPSCF-NL |
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| LRR_1 | LRR3_d.AA | LRR_1 | 198-220 | 44 | 0.000412 | 18.75 | Pfam | 1-26 (26) | Show / Hide |
Range on Protein: 198-220 Range on HMM: 1-26/26 Sequence Identity: 44% (12 aa) PLLRLDLSS-N--RLTGAIPDD-LGGL | .||||. | .||| ||.. . .| NLQHLDLSGCNCCNLTGHIPPSCF-NL |
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| LRR_1 | LRR3_d.AA | LRR_1 | 175-197 | 40 | 0.05878 | 11.11 | Pfam | 1-26 (26) | Show / Hide |
Range on Protein: 175-197 Range on HMM: 1-26/26 Sequence Identity: 40% (11 aa) ALHSLVLSG-N--RLTGGIPLG-LSRA | .| ||| | .||| || . . NLQHLDLSGCNCCNLTGHIPPSCF-NL |
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| LRR_1 | LRR3_d.AA | LRR_1 | 226-245 | 50 | 0.010448 | 13.77 | Pfam | 4-26 (26) | Show / Hide |
Range on Protein: 226-245 Range on HMM: 4-26/26 Sequence Identity: 50% (12 aa) TLNLSD-N--NLSGPIPPS-LGRL .|.||. | ||.| |||| . | HLDLSGCNCCNLTGHIPPSCF-NL |
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| LRR_1 | LRR3_d.AA | LRR_1 | 250-271 | 40 | 7.226245 | 3.7 | Pfam | 4-26 (26) | Show / Hide |
Range on Protein: 250-271 Range on HMM: 4-26/26 Sequence Identity: 40% (10 aa) SIDLSF-N--NLSGPIPLNGTLSNQ ..||| | ||.| || . .. | HLDLSGCNCCNLTGHIPPS-CF-NL |
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| Kinase | LRR3_d.AA | IRAK | 451-546 | 25 | 1.5e-14 | 48.11 | In-house | 2-90 (317) | Show / Hide |
Range on Protein: 451-546 Range on HMM: 2-90/317 Sequence Identity: 25% (25 aa) ASAYVLGKGSSGIVYKAVMDGGL-TVVVRRLGAEGEFGAGVDATTSNPASKKVVKEFES---EVKAIGSLCHPNVVALRAYYWGMNEKLLVYDFMPNGSL . . ..|.| | ||...... ...|..| .. .. ... ..| . |.|. ...|||.|.| .| . . |||..|||||| HKDNRIGEGGFGCVYRGQWKNTTGIYAVKKLKEM-----------ADMSWNEHWQRFQQSYNELKVCCRCRHPNIVPLYGYCTERQCHCLVYPYMPNGSL |
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| Kinase | LRR3_d.AA | TKL | 456-546 | 20 | 7.3e-13 | 42.65 | In-house | 1-125 (364) | Show / Hide |
Range on Protein: 456-546 Range on HMM: 1-125/364 Sequence Identity: 20% (25 aa) LGKGSSGIVYKAVMDG---------GLTVVVRRLGAEGEFGAGVDATT------------SNPASKKVVKEFESEVKAIGSLCHPNVVALRAYY------ .|.|..|.|||.. | | .|.| .. . . .| ... ...| |.. . .|.|||.| . .| IGSGGFGEVYKGKWRGWGGKCPSDTGKDVAVKKFKSHNDDEFTKNSQENNDNNNYSDMQLNDPEASWFRFFEEEEIMMMSRLRHPNIVQFMGYCCCPPCG -WGMN------EKLLVYDFMPNGSL . |. . .|....|.||| CVCMHPVGPWGQLCIVMEYCPGGSL |
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| Kinase | LRR3_d.AA | RTKE | 502-553 | 32 | 6.5e-05 | 12.63 | In-house | 55-106 (293) | Show / Hide |
Range on Protein: 502-553 Range on HMM: 55-106/293 Sequence Identity: 32% (17 aa) VVKEFESEVKAIGSLCHPNVVALRAYYWGMNEKLLVYDFMPNGSLAAAMEQH . .||..|. . | ||||| | . . ..||..|| |.|. . ..| CHHEFVQEMTMMCKLHHPNVVHLLHVVQMKQHFMMVYEYMPGGQLEDWLQDH |
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| Kinase | LRR3_d.AA | MLK | 450-547 | 19 | 0.000836 | 9.23 | In-house | 1-98 (291) | Show / Hide |
Range on Protein: 450-547
Range on HMM: 1-98/291
Sequence Identity: 19% (21 aa)
RASAYVLGKGSSGIVYKAVMDGGL----TVVVRRLGAEGEFGAGVDATTSNPASKKVVKEFESEVKAIGSLCHPN----VVALRAYYWGM-NEKLLVYDF
..|.||.| |.|... . . .| |.| |. . ... . . ..|| |.. |.||| ...... .. ..| .
IQFHEWIGSGSFGKVWKGRWRNKDIVAKIVAVKRVRARIF-DKSDTYCEQ--------WDFEMECRHLRILSHPNNHPCIIQFYGVCLQPPCHFCIVMEY
MPNGSLA
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CEGGSLY
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