Gene 16385 (Tetrahymena)

16385

Species: Tetrahymena
Alias: 3836.m02053, 975, 6.m00459, 16385, PreTt16385, TTHERM_00085370
External Links: Tetrahymena Genome Database (TGD)
Annotation:

Classification

Group: Other
Family: Ciliate-A4

Sequence

Name Sequence Type Origin Length Description Download
16385.AA Protein None 687 None Fasta, JSON
16385.kin_dom Protein Kinase Domain None 276 None Fasta, JSON
16385.NA RNA None 2064 None Fasta, JSON

Protein domain

Protein domains of 16385.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.

Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking.

Show/hide domain list
Domain Protein name Domain Name Range Identity (%) Significance Score Profile Source Profile Range (length) Alignment
Kinase 16385.AA Ciliate-A4 271-546 58 3.1e-181 596.33 In-house 1-284 (284) Show / Hide 
Range on Protein: 271-546
Range on HMM: 1-284/284
Sequence Identity: 58% (165 aa)

FYHYEKLDKGSFGQVDLYFFEIDQYDLCNFQSKYENQQSNYFINRENNNQYNQNSYIFSSQNSSQSNQSQSTNQDTLQQNNINNSQTSQGSTYQGSTQLY
||.|.....||||.|||||||||.|..||||....|||.....|..|.||||||.||.|||...|..|..|.|||..|.||...||..|...||...|..
FYYYTSIGEGSFGTVDLYFFEIDYYQKCNFQDQQQNQQTWHQNNNQNYNQYNQNQYIQSSQQMQQQKQQFSFNQDQQQYNNMMFSQEMQQQQYQKFNQKW

STSKKQIIGNNNISSHLVDQKNQNLNYQVNIQLNSKNYLPAAGKKIKIKYEFIRELFIMQKVQSEYMPSLLGQDIEQQILFIELGLCSLYDLKMYSEKQN
|.|..||....|...|...||.||..||...|.....|||.|.||||...||||||.|||.||.||||.|...||.|||||.|.|||||||||..||..|
SQSHQQIYQYQNQDMHNYIQKQQNVYYQKIQQFMKMQYLPVACKKIKTQEEFIRELYIMQTVQCEYMPKLFYYDIDQQILFMEMGLCSLYDLKQDSEQNN

YKISDNLAYSILINLFQAIESLLQN--FDQQENKILPLFHSDIKPQN-----IILTVKNSKENIP-QIQLLLIDFGGASFQAED
|..||...|||||||.|||||.|.|  ..|||.|. |||||||||||     |.||||.|||... ||||.||||||||||.||
YCFSDEFTYSILINLIQAIESMLSNKAYNQQEQKHQPLFHSDIKPQNKIQLQIMLTVKKSKEDQQSQIQLMLIDFGGASFQLED
Kinase 16385.AA S_TKc 397-632 15 6e-06 -90.01 SMART 1-231 (231) Show / Hide 
Range on Protein: 397-632
Range on HMM: 1-231/231
Sequence Identity: 15% (44 aa)

YQVNIQL------------NSKNYLPAAGKKIKIKYEFIRELFIMQKVQSEYMPSLLGQDIEQQILFIELGLCSL--YDLKMYSEKQNYK-----ISDNL
|..  ..            . |     | |.||    ..||. |..| . ..   |..   . . |.. . .|.    ||. | .|....     ..   
YEILRKIGKGAFGKVYKCRHKKTGRIVAIKIIK--EHIRREIQILKK-HHPNIVKLYDVFQD-DHLYMVMEYCDGDLGDLFDYIKKRGRHGLRFPFPE-H

AYSILINLFQAIESLLQNFDQQENKILPLFHSDIKPQNIILTVKNSKENIPQIQLLLIDFGGASFQAEDYWSYF-TPAFVCPKLWEKLVNSKSQK-----
| ...  ...|.| .       ...|.   | |.||.|| |.           .. ..||| | .      ..  || .. | .       .  |     
ARFYMYQICCALEYC------HSHGII---HRDLKPENILLDE----------HIKICDFGLARQL----TTFCGTPWYMAPEVL------GYGKCKCDW

--------EFLT----WPEIRYAELYAACRSVQFLILNQNDQNLFKKENSQDFIQSYQKLYPK----TCKILE-------EVYL
        |.|.    .|   .....  ..                 .   |||.   .  |.      ..|.         ..
WSCGCILYEMLCGYPPFP--QMQMMFKKIG----------------SPEAKDFIRKCLQKDPEKRPTA-EALQDEWDIKCHPWF
Kinase 16385.AA DAPK 508-538 54 5.1e-05 9.45 In-house 126-152 (264) Show / Hide 
Range on Protein: 508-538
Range on HMM: 126-152/264
Sequence Identity: 54% (17 aa)

HSDIKPQNIILTVKNSKENIPQIQLLLIDFG
| |.||||| || .    ||||  . .||||
HLDLKPQNIMLTDR----NIPQGDIKIIDFG
Kinase 16385.AA Ciliate-E2 510-558 16 6.3e-05 12.84 In-house 186-256 (365) Show / Hide 
Range on Protein: 510-558
Range on HMM: 186-256/365
Sequence Identity: 16% (14 aa)

DIKPQNIILTVKNSKENIPQIQLLLIDFGGASFQAEDYWSYF-----------------------------------TPAFVCP
||||.||..             . .|||| . .. .|.  ..                                   || ...|
DIKPENILF-------------IKIIDFGLSKKYDDDNQNRTHKQQCKWYMFKNDTSRTPGYMDQIIQQNMFNTICGTPGYMAP
Kinase 16385.AA Ciliate-C4 499-538 41 0.000138 10.24 In-house 157-194 (361) Show / Hide 
Range on Protein: 499-538
Range on HMM: 157-194/361
Sequence Identity: 41% (18 aa)

QENKILPLFHSDIKPQNIILTVK---NSKENIPQIQLLLIDFG
..||.    |.|||| || .  |   ....|| |.   |||||
HQNKWV---HCDIKPENILVKYKSDFGGSNNIQQVK--LIDFG
Kinase 16385.AA Ciliate-E2a 510-538 41 0.000161 9.25 In-house 127-154 (275) Show / Hide 
Range on Protein: 510-538
Range on HMM: 127-154/275
Sequence Identity: 41% (12 aa)

DIKPQNIILTVKNSKENIPQIQLLLIDFG
|.||.||...  .||..|.. .. .||||
DLKPENILFKN-CSKNSIQNSDIKIIDFG
Kinase 16385.AA CDPK 508-540 30 0.000346 8.98 In-house 126-157 (271) Show / Hide 
Range on Protein: 508-540
Range on HMM: 126-157/271
Sequence Identity: 30% (10 aa)

HSDIKPQNIILTVKNSKENIPQIQLLLIDFGGA
| |.||.|| .. |..  ..   .. .||.| .
HRDLKPENILFDSKKDDSWV-IYNIKVIDWGTS