Gene 12019 (Tetrahymena)

12019

Species: Tetrahymena
Alias: 1.m01067, PreTt12019, 12019, 1037, TTHERM_00024060
External Links: Tetrahymena Genome Database (TGD)
Annotation:

Classification

Group: Other
Family: Ciliate-E1

Sequence

Name Sequence Type Origin Length Description Download
12019.AA Protein None 609 None Fasta, JSON
12019.kin_dom Protein Kinase Domain None 84 None Fasta, JSON
12019.NA RNA None 1830 None Fasta, JSON

Protein domain

Protein domains of 12019.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.

Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking.

Show/hide domain list
Domain Protein name Domain Name Range Identity (%) Significance Score Profile Source Profile Range (length) Alignment
Kinase 12019.AA Ciliate-E1 2-134 21 6.8e-21 65.02 In-house 52-202 (202) Show / Hide 
Range on Protein: 2-134
Range on HMM: 52-202/202
Sequence Identity: 21% (32 aa)

KNFNSTIQLFDCFDLDELKTFILITESINQTFYDYIQ--------NMYSSSLIEPDFGEVVNIFQSLLFSLFEIHSKGFYHLNINPHSIVFDQSGNLKFR
|.  ..||..|....|.....|.|.|. .....||.|        .....  .. .| ....|.  |.. | |.|.....|..|.|. |.....||... 
KKECYIIQIIDYIKIDQNYICIIIFECCCCSLKDYLQNHNRLEYWQQCQQNQNQFTFQQKMQIIFQLIDGLIELHQYNIIHRDIKPQNILINNQGNYVYC

-----NFLNFNELNYFETSKMIKDPYYSFF-N----SPEADQIIPKTLNIY
      ||. |....   . ...  |..   |    ... .|.| . ..||
DFGISKFLKNNQNQQCQYKGYTHYYYPPEQYNCPEQEHNKNQKINYKSDIY
Kinase 12019.AA Ciliate-B2 54-95 28 2e-05 8.63 In-house 107-148 (197) Show / Hide 
Range on Protein: 54-95
Range on HMM: 107-148/197
Sequence Identity: 28% (12 aa)

VNIFQSLLFSLFEIHSKGFYHLNINPHSIVFDQSGNLKFRNF
....  |.  | .....   || |.|  | | |.|| .. .|
YQMIFQLIDGLIQFRMYNILHLDIKPQNILFMQNGNYVYCDF
TPR 12019.AA TPR 283-316 17 0.054219 11.71 SMART 1-34 (34) Show / Hide 
Range on Protein: 283-316
Range on HMM: 1-34/34
Sequence Identity: 17% (6 aa)

YSLMYEIGIFYYESDNVQKCLDLFKQTLLIRQNL
.   | .|  ||   . ..... ... | .  | 
AEAWYNLGNCYYKMGDYDEAIECYQKALELDPNN
TPR_2 12019.AA TPR_2 283-316 17 0.20927 9.06 Pfam 1-34 (34) Show / Hide 
Range on Protein: 283-316
Range on HMM: 1-34/34
Sequence Identity: 17% (6 aa)

YSLMYEIGIFYYESDNVQKCLDLFKQTLLIRQNL
  . | .|  ||.  . .. ...... | .  | 
AEAWYNLGQCYYKQGDYDEAIEYYEKALKLDPNN
TPR_1 12019.AA TPR_1 283-316 20 0.744734 6.97 Pfam 1-34 (34) Show / Hide 
Range on Protein: 283-316
Range on HMM: 1-34/34
Sequence Identity: 20% (7 aa)

YSLMYEIGIFYYESDNVQKCLDLFKQTLLIRQNL
.   | .|  ||.  | .. .. ... | .. | 
AEAWYNLGNCYYKMGNYDEAIECYQKALELNPNN
TPR 12019.AA TPR 325-358 26 0.000249 21.63 SMART 1-34 (34) Show / Hide 
Range on Protein: 325-358
Range on HMM: 1-34/34
Sequence Identity: 26% (9 aa)

SESYNSVGNSNYYLDNFQEALQFYEKSCNLRKEL
.| ..  ||. | . ...||...|.|.  |  . 
AEAWYNLGNCYYKMGDYDEAIECYQKALELDPNN
TPR_2 12019.AA TPR_2 325-358 26 0.000316 19.04 Pfam 1-34 (34) Show / Hide 
Range on Protein: 325-358
Range on HMM: 1-34/34
Sequence Identity: 26% (9 aa)

SESYNSVGNSNYYLDNFQEALQFYEKSCNLRKEL
 | ..  |.. |.. ...||...|||.  |  . 
AEAWYNLGQCYYKQGDYDEAIEYYEKALKLDPNN
TPR_1 12019.AA TPR_1 325-358 29 0.000671 17.6 Pfam 1-34 (34) Show / Hide 
Range on Protein: 325-358
Range on HMM: 1-34/34
Sequence Identity: 29% (10 aa)

SESYNSVGNSNYYLDNFQEALQFYEKSCNLRKEL
.| ..  ||  | . |..||...|.|   |. . 
AEAWYNLGNCYYKMGNYDEAIECYQKALELNPNN
TPR 12019.AA TPR 367-400 20 0.072523 10.6 SMART 1-34 (34) Show / Hide 
Range on Protein: 367-400
Range on HMM: 1-34/34
Sequence Identity: 20% (7 aa)

SECFTNIADCYRWLNNVEMSIQFNQLAIDIQNKT
.|.. |.. ||. ... .. |.. | |.... . 
AEAWYNLGNCYYKMGDYDEAIECYQKALELDPNN
TPR_1 12019.AA TPR_1 367-400 23 0.201724 8.95 Pfam 1-34 (34) Show / Hide 
Range on Protein: 367-400
Range on HMM: 1-34/34
Sequence Identity: 23% (8 aa)

SECFTNIADCYRWLNNVEMSIQFNQLAIDIQNKT
.| ..|.. ||. ..| .  |.. | |.... . 
AEAWYNLGNCYYKMGNYDEAIECYQKALELNPNN
TPR_2 12019.AA TPR_2 367-400 17 59.254593 0.38 Pfam 1-34 (34) Show / Hide 
Range on Protein: 367-400
Range on HMM: 1-34/34
Sequence Identity: 17% (6 aa)

SECFTNIADCYRWLNNVEMSIQFNQLAIDIQNKT
 |.  |...||. ... .  |.. . |. .  . 
AEAWYNLGQCYYKQGDYDEAIEYYEKALKLDPNN
TPR 12019.AA TPR 409-442 8 0.051182 11.93 SMART 1-34 (34) Show / Hide 
Range on Protein: 409-442
Range on HMM: 1-34/34
Sequence Identity: 8% (3 aa)

IFSLICMGQIARWKNNHQKSLEYHLQVLKMREDI
.  . ..|.. . ...... .|.  ..|.. .. 
AEAWYNLGNCYYKMGDYDEAIECYQKALELDPNN
TPR_1 12019.AA TPR_1 409-442 11 0.478692 7.64 Pfam 1-34 (34) Show / Hide 
Range on Protein: 409-442
Range on HMM: 1-34/34
Sequence Identity: 11% (4 aa)

IFSLICMGQIARWKNNHQKSLEYHLQVLKMREDI
   .  .|.. . ..|... .|.  ..|..... 
AEAWYNLGNCYYKMGNYDEAIECYQKALELNPNN
TPR_2 12019.AA TPR_2 409-442 17 0.497254 7.73 Pfam 1-34 (34) Show / Hide 
Range on Protein: 409-442
Range on HMM: 1-34/34
Sequence Identity: 17% (6 aa)

IFSLICMGQIARWKNNHQKSLEYHLQVLKMREDI
   . ..||... ...... .||  ..||  .. 
AEAWYNLGQCYYKQGDYDEAIEYYEKALKLDPNN
TPR 12019.AA TPR 451-484 26 0.000327 21.24 SMART 1-34 (34) Show / Hide 
Range on Protein: 451-484
Range on HMM: 1-34/34
Sequence Identity: 26% (9 aa)

PLSYRTIGICYKYLKDYEKSFEYHKKALLMKQEI
.  .  .| ||  ..||..  |. .||| .  . 
AEAWYNLGNCYYKMGDYDEAIECYQKALELDPNN
TPR_1 12019.AA TPR_1 451-484 23 0.000765 17.4 Pfam 1-34 (34) Show / Hide 
Range on Protein: 451-484
Range on HMM: 1-34/34
Sequence Identity: 23% (8 aa)

PLSYRTIGICYKYLKDYEKSFEYHKKALLMKQEI
.  .  .| ||  ...|..  |. .||| .  . 
AEAWYNLGNCYYKMGNYDEAIECYQKALELNPNN
TPR_2 12019.AA TPR_2 451-484 29 0.005954 14.53 Pfam 1-34 (34) Show / Hide 
Range on Protein: 451-484
Range on HMM: 1-34/34
Sequence Identity: 29% (10 aa)

PLSYRTIGICYKYLKDYEKSFEYHKKALLMKQEI
.  .. .| || ...||..  || .|||    . 
AEAWYNLGQCYYKQGDYDEAIEYYEKALKLDPNN
TPR_1 12019.AA TPR_1 493-510 33 15.992287 2.32 Pfam 1-18 (34) Show / Hide 
Range on Protein: 493-510
Range on HMM: 1-18/34
Sequence Identity: 33% (6 aa)

ANSFFDLADCYLGIQDYD
|. .. |. ||.  ..||
AEAWYNLGNCYYKMGNYD
TPR_2 12019.AA TPR_2 493-510 38 31.352345 1.36 Pfam 1-18 (34) Show / Hide 
Range on Protein: 493-510
Range on HMM: 1-18/34
Sequence Identity: 38% (7 aa)

ANSFFDLADCYLGIQDYD
|   . |..||.  .|||
AEAWYNLGQCYYKQGDYD