Gene 8550 (Tetrahymena)

8550

Species: Tetrahymena
Alias: 132.m00109, PreTt08550, 3755.m00469, 1111, 8550, TTHERM_00787230
External Links: Tetrahymena Genome Database (TGD)
Annotation:

Classification

Group: Other
Family: Ciliate-G

Sequence

Name Sequence Type Origin Length Description Download
8550.AA Protein None 1053 None Fasta, JSON
8550.kin_dom Protein Kinase Domain None 21 None Fasta, JSON
8550.NA RNA None 3162 None Fasta, JSON

Protein domain

Protein domains of 8550.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.

Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking.

Show/hide domain list
Domain Protein name Domain Name Range Identity (%) Significance Score Profile Source Profile Range (length) Alignment
Kinase 8550.AA Ciliate-C6 135-158 57 3.4e-09 28.72 In-house 156-181 (306) Show / Hide 
Range on Protein: 135-158
Range on HMM: 156-181/306
Sequence Identity: 57% (15 aa)

NFQHKDIKPSNIVIKNG--HYYLTDF
|. | ||||||| |...   |||.||
NIAHRDIKPSNILIMDDENNYYLSDF
Kinase 8550.AA Ciliate-E1 24-188 16 9.7e-08 21.75 In-house 2-202 (202) Show / Hide 
Range on Protein: 24-188
Range on HMM: 2-202/202
Sequence Identity: 16% (34 aa)

GQGGFKNVYECVNTQKQQNLIVKISMGDGNADLKNEHANSLKIQFKPLKLAKIDELHSLEFNGE-EYLVGISEIVGE--KNLGMVIE-------------
|.|.|  |.. .. . ..| . ..      .. .|.  . .| ..|..|. | . .. .    . ... .. .|. .  ..|   ..             
GNGSFSIVFKAKQQNNNYNQVAQKIINCCFNYNQNHFQDEIKEYYKIMKFKKECYIIQIIDYIKIDQNYICIIIFECCCCSLKDYLQNHNRLEYWQQCQQ

SKEKPTLANAIKMLIDILFGAFECQISNFQHKDIKPSNIVIKN-GHYYLTDFSSQD-----------ETNIITNSFSPQDYN--------TKNVIQRFDI
 . . |  . ... .....|  | .. |. | ||||.||.|.| | | ..||.  .           ... ...  .|. ||        .... .  ||
NQNQFTFQQKMQIIFQLIDGLIELHQYNIIHRDIKPQNILINNQGNYVYCDFGISKFLKNNQNQQCQYKGYTHYYYPPEQYNCPEQEHNKNQKINYKSDI

F
.
Y
Kinase 8550.AA Ciliate-B2 118-158 35 2e-06 11.03 In-house 107-148 (197) Show / Hide 
Range on Protein: 118-158
Range on HMM: 107-148/197
Sequence Identity: 35% (15 aa)

IKMLIDILFGAFECQISNFQHKDIKPSNIVI-KNGHYYLTDF
..|  . . |  .  . |  | ||||.|| . .|| | ..||
YQMIFQLIDGLIQFRMYNILHLDIKPQNILFMQNGNYVYCDF
Kinase 8550.AA Ciliate-E2b 138-158 40 3.4e-05 11.92 In-house 125-146 (272) Show / Hide 
Range on Protein: 138-158
Range on HMM: 125-146/272
Sequence Identity: 40% (9 aa)

HKDIKPSNIVIKN-GHYYLTDF
. ||||.|| . . |. .| |.
YRDIKPENIMVDHKGYMKLIDM
Kinase 8550.AA S_TKc 17-335 13 6.3e-05 -104.69 SMART 1-231 (231) Show / Hide 
Range on Protein: 17-335
Range on HMM: 1-231/231
Sequence Identity: 13% (46 aa)

LEIVTLKGQGGFKNVYECVNTQKQQNLIVKISMGDGNADLKNEHANSLKIQFKPLKLAKIDELHSLEFNGEEYLVGISEIVGE--KNLGMVIESKEKP--
 ||. . |.|.|  || |...  ..   .||       ....| .   |      .   |  |.    .  ..|  . | ..    .|  .|... ..  
YEILRKIGKGAFGKVYKCRHKKTGRIVAIKIIK----EHIRREIQILKK------HHPNIVKLYDVFQD--DHLYMVMEYCDGDLGDLFDYIKKRGRHGL

----TLANAIKMLIDILFGAFECQISNFQHKDIKPSNIVIKNGHYYLTDF--SSQDETNIITNSFSPQDYNTKNVIQRFDIFSLGQTCNLYIKVIMQMNK
    .   | ...  |. .   |   .. | |.||.|| . . |  ..||  . |                                             
RFPFPE-HARFYMYQICCALEYCHSHGIIHRDLKPENILLDE-HIKICDFGLARQL--------------------------------------------

KEQVVFQTLISYINPICQIITTIKAYISILCFIEKNDLIQSYYG-----------LFIILEIAEFYFEKNNYNDCNEYLKKLECLENDEFDEEKFILYIS
                  .. |   |..   .        .| .           |.. |   .  |.     . .. .||.                  
----------------TTFCGTP-WYMAPEVL--------GYGKCKCDWWSCGCILYEMLC-GYPPFP-----QMQMMFKKIG-----------------

IGYYKLLFFLKYSQNSENCLEYLEKAIQL-------AQKLEQ------THPLK
               |. ... ..|  |        | .. |       ||  
---------------SPEAKDFIRKCLQKDPEKRPTA-EALQDEWDIKCHPWF
Kinase 8550.AA MOK 138-160 56 0.000157 9.55 In-house 123-145 (283) Show / Hide 
Range on Protein: 138-160
Range on HMM: 123-145/283
Sequence Identity: 56% (13 aa)

HKDIKPSNIVIKNGHYYLTDFSS
|.|.|| ||.||. |  |.|| |
HRDVKPENILIKQDHLKLADFGS
Kinase 8550.AA CK1-Unclassified 17-47 29 0.000515 7.76 In-house 1-31 (244) Show / Hide 
Range on Protein: 17-47
Range on HMM: 1-31/244
Sequence Identity: 29% (9 aa)

LEIVTLKGQGGFKNVYECVNTQKQQNLIVKI
 ...   ||| | ..|.|.|.| ...  .|.
YRVIEKIGQGSFGEIYKCINMQTNEEVAIKL
Kinase 8550.AA Ciliate-E2 135-158 41 0.001345 8.2 In-house 181-200 (365) Show / Hide 
Range on Protein: 135-158
Range on HMM: 181-200/365
Sequence Identity: 41% (10 aa)

NFQHKDIKPSNIVIKNGHYYLTDF
|  | ||||.||..      ..||
NIIHRDIKPENILF----IKIIDF
Kinase 8550.AA Ciliate-E2 17-46 31 0.005354 6.11 In-house 1-32 (365) Show / Hide 
Range on Protein: 17-46
Range on HMM: 1-32/365
Sequence Identity: 31% (10 aa)

LEIVTLKGQGGFKNVYEC--VNTQKQQNLIVK
 ... . |||.|  ||.|   ..|||......
YKFIKKIGQGNFGSVYKCKVWKVQKQFAIKII