Gene 22120 (M.brevicollis)

22120

Species: M.brevicollis
Alias: 22120
External Links:
Annotation:

Classification

Group: TK-assoc
Family: PTB
Subfamily: SHC-like

Sequence

Name Sequence Type Origin Length Description Download
22120.AA Protein None 929 None Fasta, JSON

Protein domain

Protein domains of 22120.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.

Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking.

Show/hide domain list
Domain Protein name Domain Name Range Identity (%) Significance Score Profile Source Profile Range (length) Alignment
PID 22120.AA PID 91-232 25 1.7e-21 77.2 Pfam 1-143 (153) Show / Hide 
Range on Protein: 91-232
Range on HMM: 1-143/153
Sequence Identity: 25% (39 aa)

FPVTYIGRHQVAKSLRTVEFPVRRRICQEAIARVREASNTRDPIPRDVDKASAKFLDRFEADIKLESIVINISVEGIVLATPDE---DRVIAHHRMACIS
| | |.|  .|... |.  . .|  .|||.|.||...            |  .|.... ..  .. .|...|| .|. . ...     .....|.|  ||
FEVRYLGCVEVPCHMRRPDKNTRMMQCQECIHRVCMQVP---------AKKINKIRGHRGHWQHWQKIDLHISTDGVKWIDEKTEAEQECMHDHPMRNIS

FAAG-GDFE-DYDQVAY--IAKTKLG-RICYVFDCGQ--YSNQVLSTIGQAF
|.|. || . | . .||  ... ... ..|.|| |       .. .|.||||
FCADGGDPHVDMRYFAYDICRDGPCQRFACHVFWCCKTQQAQDIAQTVGQAF
PTB 22120.AA PTB 86-245 20 1.6e-14 55.52 SMART 1-156 (156) Show / Hide 
Range on Protein: 86-245
Range on HMM: 1-156/156
Sequence Identity: 20% (37 aa)

GVFYSFPVTYIGRHQVAKSLRTVEFPVRRRICQEAIARVREASNTRDPIPRDVDKASAKFLDRFEADIKLESIVINISVEGIVLATPDEDRVIAHHRMAC
..  .| |.|.|  .|... .   .. ..  |||.....|                        .  ..  .....||| |. | .|.  .||.||..  
PWGCCFNVWYLGCVEVPHHRNSMAPGKGMQVCQECMRKIR------------------------QHWKHWQKMHLHISVDGVKLIDPQTKQVIHHHPIHR

ISFAAGGD----------FEDYDQVAYIAKTKL---------GRICYVFDCGQYS-NQVLSTIGQAFVTAGEQQDLEYDE
|||.| ..           .| . ..||.. .           ..|.|| | . . ... .|||||| .. .|.  .  .
ISFCAHDPYRWNTGGHHCCDDDRCFGYICRHPNDRGSHRMTYWFRCHVFWCEDPHAEDIAQTIGQAFQVCYQQCQKQRCQ