Gene 2433 (M.brevicollis)

2433

Species: M.brevicollis
Alias: 2433
External Links:
Annotation:

Classification

Group: TK-assoc
Family: PTP

Sequence

Name Sequence Type Origin Length Description Download
2433.AA Protein None 839 None Fasta, JSON

Protein domain

Protein domains of 2433.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.

Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking.

Show/hide domain list
Domain Protein name Domain Name Range Identity (%) Significance Score Profile Source Profile Range (length) Alignment
TNFR 2433.AA TNFR 93-133 32 1.5e-07 32.35 SMART 1-50 (50) Show / Hide 
Range on Protein: 93-133
Range on HMM: 1-50/50
Sequence Identity: 32% (16 aa)

CT--SGTYSADVTDT----LCLACR-NACDP--ASEFEVVPCTRTTNRMC
|.   |.|...  .|     ||.||   |.|  . .... |||.| |. |
CKCQEGHYCHHWNHTHYEPHCLPCRHTRCPPEHMGQYMKQPCTATSNTVC
TNFR_c6 2433.AA TNFR_c6 93-133 38 2.3e-05 21.79 Pfam 1-41 (41) Show / Hide 
Range on Protein: 93-133
Range on HMM: 1-41/41
Sequence Identity: 38% (16 aa)

CTSG-TYSADVTDTLCLACRNACDPASEFEVVPCTRTTNRMC
|  | ||... .   ||.|   |.|  ...| |||.| |. |
CPPGKTYTDWNHVPHCLSC-TRCHPMGQYMVQPCTWTQNTVC
TNFR_c6 2433.AA TNFR_c6 136-157 34 0.932574 6.02 Pfam 19-41 (41) Show / Hide 
Range on Protein: 136-157
Range on HMM: 19-41/41
Sequence Identity: 34% (8 aa)

CTVCGT-QEWMAADCTETTDRDC
||.|    . | ..||.| ...|
CTRCHPMGQYMVQPCTWTQNTVC
TNFR_c6 2433.AA TNFR_c6 186-200 37 13.907055 2.01 Pfam 1-16 (41) Show / Hide 
Range on Protein: 186-200
Range on HMM: 1-16/41
Sequence Identity: 37% (6 aa)

CTGG-LYRSETHAPSC
|  |  | .. |.| |
CPPGKTYTDWNHVPHC
TNFR_c6 2433.AA TNFR_c6 220-244 44 0.011436 12.55 Pfam 17-41 (41) Show / Hide 
Range on Protein: 220-244
Range on HMM: 17-41/41
Sequence Identity: 44% (11 aa)

NSCTSCNPTQEYQTQACTASTNREC
.|||.|.|  .| .| ||.  |..|
LSCTRCHPMGQYMVQPCTWTQNTVC
TNFR 2433.AA TNFR 250-283 18 0.149129 2.18 SMART 1-50 (50) Show / Hide 
Range on Protein: 250-283
Range on HMM: 1-50/50
Sequence Identity: 18% (9 aa)

CT--NTEYLV---------VCAKCT-SQCPT---HAYLSGLLSN-TDIVC
|.    .|            | .|. ..||      |..   .   . ||
CKCQEGHYCHHWNHTHYEPHCLPCRHTRCPPEHMGQYMKQPCTATSNTVC
Y_phosphatase 2433.AA Y_phosphatase 570-778 37 2.1e-78 271.55 Pfam 31-243 (243) Show / Hide 
Range on Protein: 570-778
Range on HMM: 31-243/243
Sequence Identity: 37% (82 aa)

YINGNWMDG-FSQSREYIVTQGPLPNTIDAFWRMVWEFKVCQIVMITNLKEKGR-VK-CEKYWP--FEGEQLKIGDLILLCEEVKLHAAFQVAQLRVVHR
||| |..|| . ....||.||||.|.||. ||||||. |.  |||..|. |.|| .| |..|||   ||. ...||..  |.... .. . | ...| . 
YINANYIDGPYWNPKAYICTQGPMPHTIEDFWRMVWQQKCTCIVMLCNCMEMGRDEKTCHQYWPDNKEGQPMTYGDFQVTCVSEEHCPDYTVRTFEVTN-

HT--GVAHTVHHLWFQDWPDHGVPDT-TEAVIDLLLTSRELRTRALASREQVAPIAVHCSAGIGRSGVFVGCDILLQQAESFGQVDALGALCHMRRARGG
 .  .  .||.|... .|||||||.. . ...|..   |. ...  ...   .|| ||||||.||.|.|.. ||..|| |  | || .....|||. | |
GDQKQETRTVTHYHYTNWPDHGVPESQPKSMLDFIRQVRKWQPNPDHGC---PPIVVHCSAGCGRTGTFCAIDIMCQQMEHEGTVDIFQIVKHMRNQRPG

CVQTPHQWLYMLLVAHD
.|||..| ...  .  .
MVQTEEQYIFCYQCILE
PTPc 2433.AA PTPc 534-781 26 5.8e-75 256.26 SMART 1-308 (308) Show / Hide 
Range on Protein: 534-781
Range on HMM: 1-308/308
Sequence Identity: 26% (82 aa)

DLARLVKDLKAVETQFR--------EVPVGCVMALL--TLHPSPA-------------------------SYINGNWMDGFSQSREYIVTQGPLPNTIDA
 ...  ..|...... .        . ...|  .    .   ..                           ||| |..||. ....||.||||||.||. 
GFWEEFERLQRMTPWDLMSNYDPCCSCTCACWPENREMDKNRYKCDIPCYDHTRVKLKPPPGESHCYEGSDYINANYIDGYWRPKRYICTQGPLPHTIED

FWRMVWEFKVCQIVMITNLKEK--------GRVKCEKYWPFEGEQLKIGDLILLCEEVKLHA-AFQVAQLRVVHRHT--------GVAHTVHHLWFQDWP
||||||. |...|||..|. ||        ||.||..||| |   .. |.... |.... ..  ... ...| .  .        .  .||.|... .||
FWRMVWQQKCHIIVMLCNCMEKCTENRDQNGREKCHQYWPDE--PMTYGHITVTCKSEEKCPDDYTMRTFEVTNTGCNCKYSMACSETRTVTHYHYTNWP

DHGVPDTTEAVIDLLLTSRELRTRA-------------LASREQVAPIAVHCSAGIGRSGVFVGCDILLQQAESFGQVDALGALCHMRRARGGCVQTPHQ
|||||.......|.. . |. . .               . ... .|| ||||||.||.|.|.. ||..|| |    || .. ...||  | |.|||. |
DHGVPESPDSFLDFIRQVRHWQSHSPNMYMNMVSSNSKYHHTCPTGPIVVHCSAGCGRTGTFCAIDIMCQQIEN---VDIFQIVKMMRNQRPGMVQTEEQ

WLYMLLVAHDYLA
 ...  .. .|. 
YIFCYRCILEYIK
PTPc_motif 2433.AA PTPc_motif 671-778 32 1.6e-29 105.3 SMART 1-92 (92) Show / Hide 
Range on Protein: 671-778
Range on HMM: 1-92/92
Sequence Identity: 32% (37 aa)

TVHHLWFQDWPDH-----GVPDTTEAVIDLLLTSRELRTRALASREQVAPIAVHCSAGIGRSGVFVGCDILLQQAESFGQVDALGALCHMRRARGGCVQT
||||... .||||     |||.  .......   |.             || ||||||.||.|.|.. |...||      || .. ...||  | | |||
TVHHYHYTNWPDHVEKDSGVPE--DSILEFIRHVRK-------------PIVVHCSAGCGRTGTFCAIDMMMQQ------VDIFQTVKEMRKQRPGMVQT

PHQWLYMLLVAHD
 .| ...  .  .
EEQYIFCYRCILE