Gene 3088 (M.brevicollis)

3088

Species: M.brevicollis
Alias: 3088
External Links:
Annotation:

Classification

Group: TK-assoc
Family: PTP

Sequence

Name Sequence Type Origin Length Description Download
3088.AA Protein None 502 None Fasta, JSON

Protein domain

Protein domains of 3088.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.

Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking.

Show/hide domain list
Domain Protein name Domain Name Range Identity (%) Significance Score Profile Source Profile Range (length) Alignment
Y_phosphatase 3088.AA Y_phosphatase 27-262 40 8.5e-95 326.04 Pfam 1-243 (243) Show / Hide 
Range on Protein: 27-262
Range on HMM: 1-243/243
Sequence Identity: 40% (100 aa)

TEDLNRYFNILPNNHTRVLLPRIGDDERTEYINANFISGYGP-RAMDRYIATQGPLPHTILAFWRMVWESKTHVIVMSTDLVENNA-VK-CERYWPQ-DV
  . ||| .|... |||| |..|..|| . |||||.| |  | .   .||.||||.||||  ||||||. |...||| ....|..  .| |..|||.  .
NKEKNRYKDIPCYDHTRVKLQPIPGDEDSDYINANYIDG--PYWNPKAYICTQGPMPHTIEDFWRMVWQQKCTCIVMLCNCMEMGRDEKTCHQYWPDNKE

GTSVVYGDYVIRLQTETNTCPQFVTSKLLISCGD---DDIREITHLWWRAWPDQGVPETADGIFPFINTARDVADEEG----G--PIVVHCSAGVGRTGC
|....|||. . .. |.  || ... .. ... .   .. |..||... .|||.||||.  .  ....  | |    .    |  |||||||||.||||.
GQPMTYGDFQVTCVSEEH-CPDYTVRTFEVTN-GDQKQETRTVTHYHYTNWPDHGVPES--QPKSMLDFIRQVRKWQPNPDHGCPPIVVHCSAGCGRTGT

FINIDIGMQQWDELGVVDILSNVCKTRRQRGLSVQTPVQYVYIHFVLLE
|. ||| .|| .. |.|||.  |.. |.||  .|||. ||.... ..||
FCAIDIMCQQMEHEGTVDIFQIVKHMRNQRPGMVQTEEQYIFCYQCILE
PTPc 3088.AA PTPc 6-265 32 1e-90 308.62 SMART 1-308 (308) Show / Hide 
Range on Protein: 6-265
Range on HMM: 1-308/308
Sequence Identity: 32% (103 aa)

FPLTHPASLLNLQP-----------AIESMPRTE----DLNRYF-NILPNNHTRVLLPRIGDD----ERTEYINANFISGYGPRAMDRYIATQGPLPHTI
   .   .| ...|            ...  . |    | |||  .|... |||| |... ..    | . |||||.|.||  .   |||.|||||||||
GFWEEFERLQRMTPWDLMSNYDPCCSCTCACWPENREMDKNRYKCDIPCYDHTRVKLKPPPGESHCYEGSDYINANYIDGY--WRPKRYICTQGPLPHTI

LAFWRMVWESKTHVIVMSTDLVEN--------NAVKCERYWPQDVGTSVVYGDYVIRLQTETNTCPQFVTSKLLISCGDD---------DIREITHLWWR
  ||||||. |.|.||| ....|.        . .||..|||..   ...||.. . .. |..... ... .. .. ...         . |..||... 
EDFWRMVWQQKCHIIVMLCNCMEKCTENRDQNGREKCHQYWPDE---PMTYGHITVTCKSEEKCPDDYTMRTFEVTNTGCNCKYSMACSETRTVTHYHYT

AWPDQGVPETADGIFPFINTARDVADEE-------------------GGPIVVHCSAGVGRTGCFINIDIGMQQWDELGVVDILSNVCKTRRQRGLSVQT
.|||.||||..|... ||.. |..   .                    ||||||||||.||||.|. ||| .|| ..   |||.  |.. | ||  .|||
NWPDHGVPESPDSFLDFIRQVRHWQSHSPNMYMNMVSSNSKYHHTCPTGPIVVHCSAGCGRTGTFCAIDIMCQQIEN---VDIFQIVKMMRNQRPGMVQT

PVQYVYIHFVLLEYMR
. ||.... ..||| .
EEQYIFCYRCILEYIK
PTPc_motif 3088.AA PTPc_motif 161-262 42 9.2e-34 119.4 SMART 1-92 (92) Show / Hide 
Range on Protein: 161-262
Range on HMM: 1-92/92
Sequence Identity: 42% (46 aa)

EITHLWWRAWPDQ-----GVPETADGIFPFINTARDVADEEGGPIVVHCSAGVGRTGCFINIDIGMQQWDELGVVDILSNVCKTRRQRGLSVQTPVQYVY
...|... .|||.     ||||  |.|  ||.  |.       |||||||||.||||.|. ||. |||      |||.  |.. | ||  .|||  ||..
TVHHYHYTNWPDHVEKDSGVPE--DSILEFIRHVRK-------PIVVHCSAGCGRTGTFCAIDMMMQQ------VDIFQTVKEMRKQRPGMVQTEEQYIF

IHFVLLE
.. ..||
CYRCILE
DSPc 3088.AA DSPc 185-215 35 0.000121 18.08 Pfam 77-103 (151) Show / Hide 
Range on Protein: 185-215
Range on HMM: 77-103/151
Sequence Identity: 35% (11 aa)

FINTARDVADEEGGPIVVHCSAGVGRTGCFI
||...     ..||.. ||| ||. |..|..
FIDDC----RQKGGKVLVHCQAGISRSACLC
C1_1 3088.AA C1_1 442-474 36 8.1e-08 32.35 Pfam 23-55 (55) Show / Hide 
Range on Protein: 442-474
Range on HMM: 23-55/55
Sequence Identity: 36% (12 aa)

HPRLSRQGLRCKRCQINIHHYCLKNVDPDCRLS
...|..||..|  |. |.|| | ..|.| |...
WGWLGHQGWKCQWCHYNCHHRCHMKVPPECGCN