Gene 26140 (M.brevicollis)

26140

Species: M.brevicollis
Alias: 26140
External Links:
Annotation:

Classification

Group: TK-assoc
Family: PTP

Sequence

Name Sequence Type Origin Length Description Download
26140.AA Protein None 684 None Fasta, JSON

Protein domain

Protein domains of 26140.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.

Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking.

Show/hide domain list
Domain Protein name Domain Name Range Identity (%) Significance Score Profile Source Profile Range (length) Alignment
PTPc 26140.AA PTPc 48-303 32 1.3e-98 334.79 SMART 1-308 (308) Show / Hide 
Range on Protein: 48-303
Range on HMM: 1-308/308
Sequence Identity: 32% (101 aa)

GWIEEYSKFAAIQGVA-----------HASFTEENV--NKNRYR-NISAYDHTRVKITPNPHN----GMSDYVNANYIPGE---TKYIAAQGPVPESFYA
|  ||...  . .                .  .||.  .||||. .| .|||||||..|.|.     . |||.|||||.|.    .||..||| |. .  
GFWEEFERLQRMTPWDLMSNYDPCCSCTCACWPENREMDKNRYKCDIPCYDHTRVKLKPPPGESHCYEGSDYINANYIDGYWRPKRYICTQGPLPHTIED

FWQMVWETKVDVIAMVTNEIEG--------GKLKCHRYWPEEQNSELKLGNLRIISGPARDTA-THICKHFMLQNMDT--------NESREIVHLRYTAW
||.|||. |. .|.| .|..|.        |. |||.|||.|   ... |....       ..   . ..| ..| ..        .|.|.. |. ||.|
FWRMVWQQKCHIIVMLCNCMEKCTENRDQNGREKCHQYWPDE---PMTYGHITVTCKSEEKCPDDYTMRTFEVTNTGCNCKYSMACSETRTVTHYHYTNW

PDHGVPESASAMLSFRKAILKLQK---------------------SDTLLIHCSAGVGRTGTYIAIDTLVRRLEAGAPNLDPCAVVTEMRRARNFMVQTL
||||||||....|.|.... . |.                     .   ..|||||.|||||..|||......|.    .|.. .| .||  |..||||.
PDHGVPESPDSFLDFIRQVRHWQSHSPNMYMNMVSSNSKYHHTCPTGPIVVHCSAGCGRTGTFCAIDIMCQQIEN----VDIFQIVKMMRNQRPGMVQTE

VQYQFVFKALLEVIN
 ||.|. ...||.| 
EQYIFCYRCILEYIK
Y_phosphatase 26140.AA Y_phosphatase 71-300 40 2.7e-93 321.07 Pfam 1-243 (243) Show / Hide 
Range on Protein: 71-300
Range on HMM: 1-243/243
Sequence Identity: 40% (98 aa)

NVNKNRYRNISAYDHTRVKITPNPHNGMSDYVNANYIPG-ET---KYIAAQGPVPESFYAFWQMVWETKVDVIAMVTNEIEGGK-LK-CHRYWPE-EQNS
| .||||..| .||||||| .| | .. |||.|||||.|  .   .||..||| |...  ||.|||. |. .|.|..|..|.|.  | ||.|||. . . 
NKEKNRYKDIPCYDHTRVKLQPIPGDEDSDYINANYIDGPYWNPKAYICTQGPMPHTIEDFWRMVWQQKCTCIVMLCNCMEMGRDEKTCHQYWPDNKEGQ

ELKLGNLRIISGPARDTATHICKHFMLQNMDT--NESREIVHLRYTAWPDHGVPES-ASAMLSFRKAILKLQK-SDT----LLIHCSAGVGRTGTYIAID
... |....       ..  .  .|...| ..  .|.|.. |. ||.||||||||| . .||.|.. . | |. .|      ..|||||.|||||..|||
PMTYGDFQVTCVSEEHCPDYTVRTFEVTN-GDQKQETRTVTHYHYTNWPDHGVPESQPKSMLDFIRQVRKWQPNPDHGCPPIVVHCSAGCGRTGTFCAID

TLVRRLEAGAPNLDPCAVVTEMRRARNFMVQTLVQYQFVFKALLE
.. ...|..    | . .| .||. |..||||. ||.|. ...||
IMCQQMEHEGTV-DIFQIVKHMRNQRPGMVQTEEQYIFCYQCILE
PTPc_motif 26140.AA PTPc_motif 200-300 39 1.2e-37 132.31 SMART 1-92 (92) Show / Hide 
Range on Protein: 200-300
Range on HMM: 1-92/92
Sequence Identity: 39% (42 aa)

EIVHLRYTAWPDH-----GVPESASAMLSFRKAILKLQKSDTLLIHCSAGVGRTGTYIAIDTLVRRLEAGAPNLDPCAVVTEMRRARNFMVQTLVQYQFV
.. |. ||.||||     ||||  ...|.|.... |      ...|||||.|||||..|||.....       .| . .| |||  |..||||. ||.|.
TVHHYHYTNWPDHVEKDSGVPE--DSILEFIRHVRK-----PIVVHCSAGCGRTGTFCAIDMMMQQ-------VDIFQTVKEMRKQRPGMVQTEEQYIFC

FKALLE
 ...||
YRCILE