Gene CC1G_09673 (C.cinerea)
CC1G_09673
Species: C.cinerea
Alias: CC1G_09673
External Links:
Annotation:
Sequence
| Name | Sequence Type | Origin | Length | Description | Download |
|---|---|---|---|---|---|
| CC1G_09673.AA | Protein | None | 381 | None | Fasta, JSON |
| CC1G_09673.NA | RNA | None | 1146 | None | Fasta, JSON |
| CC1G_09673.kin_dom | Protein Kinase Domain | None | 256 | None | Fasta, JSON |
Protein domains of CC1G_09673.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.
Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking.
| Domain | Protein name | Domain Name | Range | Identity (%) | Significance | Score | Profile Source | Profile Range (length) | Alignment |
|---|---|---|---|---|---|---|---|---|---|
| Kinase | CC1G_09673.AA | PDK1 | 327-353 | 37 | 4.6e-07 | 17.14 | In-house | 210-236 (307) | Show / Hide |
Range on Protein: 327-353 Range on HMM: 210-236/307 Sequence Identity: 37% (10 aa) LLSNATCSSQTDIWMLGVMIFKLLTGR ||.. |....||| ||..|. ...|. LLTDKECTPSCDIWALGCIIYQMVAGQ |
|||||||||
| Kinase | CC1G_09673.AA | Ciliate-D1 | 338-356 | 36 | 5e-06 | 21.08 | In-house | 1-19 (19) | Show / Hide |
Range on Protein: 338-356 Range on HMM: 1-19/19 Sequence Identity: 36% (7 aa) DIWMLGVMIFKLLTGRDLF ||| .|......|.|.. | DIWSFGCILYEMLFGQPPF |
|||||||||
| Kinase | CC1G_09673.AA | SCY1 | 322-366 | 17 | 7e-06 | 16.47 | In-house | 227-284 (337) | Show / Hide |
Range on Protein: 322-366 Range on HMM: 227-284/337 Sequence Identity: 17% (10 aa) SAPETLLSN------------ATCSSQTDIWMLGVMIFKLLTGRDLFTSTGTP-LERF .|||..... .|. ..|...||. |.....| ..... ... .. | LAPEYIHEDQHTPASYNWGQEQKCTWASDMFSLGCLIWWVYNGKKPQITCNSNPYSTF |
|||||||||
| Kinase | CC1G_09673.AA | AGC | 323-371 | 26 | 2.2e-05 | 8.32 | In-house | 275-329 (395) | Show / Hide |
Range on Protein: 323-371 Range on HMM: 275-329/395 Sequence Identity: 26% (16 aa) APETLLSNATCSSQTDIWM--LGVMIFKLLTGRDLFTSTG---------TPLERFTEIRH ||| | .. . |.| ||.... .|||. |.. .| | | |.. APEIL-----YGKACDWWSFGLGCLMYEMLTGYPPFYGDNPQENRHPFRNPMEMFQKIMN |
|||||||||
| Kinase | CC1G_09673.AA | Ciliate-E2a | 328-356 | 31 | 5.2e-05 | 10.72 | In-house | 188-216 (275) | Show / Hide |
Range on Protein: 328-356 Range on HMM: 188-216/275 Sequence Identity: 31% (9 aa) LSNATCSSQTDIWMLGVMIFKLLTGRDLF |.. .. . |.| .||... ||.|. .| LKHKQYDTKCDMWSCGVIFYILLCGKPPF |
|||||||||
| Kinase | CC1G_09673.AA | MSK | 319-353 | 33 | 0.00015 | 11.29 | In-house | 170-207 (277) | Show / Hide |
Range on Protein: 319-353 Range on HMM: 170-207/277 Sequence Identity: 33% (13 aa) DYASAPETLL----SNATCSSQTDIWMLGVMIFKLLTGR .|. ||| | .. . ... |.| ||| . .|||. HYM-APEMLRRGYAQDGGYDEACDWWSLGVILYTMLTGQ |
|||||||||
| S_TKc | CC1G_09673.AA | S_TKc | 101-380 | 10 | 0.000242 | -113.22 | SMART | 1-231 (231) | Show / Hide |
Range on Protein: 101-380
Range on HMM: 1-231/231
Sequence Identity: 10% (35 aa)
ITVIRKLGSGPRSSTWLVKHIESSTYSALKIYTAAASREERGLAEEKRLVELRDVMAYSSGYSKHPCHFSTWWEESTRGRHLCYLVEPYCGL---SLEDV
...||.|.| .. ....|... . |.|| .| . .. .. ... .... . |.| ||. .| |.
YEILRKIGKGAFGKVYKCRHKKTGRIVAIKIIK---------------EHIRREIQILKK-HHPNIVKLYDVFQD-----DHLYMVMEYCDGDLGDLFDY
RNGDPMGR----LPIRTVQFVFNELVEKLSEVH-------------------------GFADGMHGSLSAENAVFWTWADVKYLKPHLSLPEGSTIDGVA
. .. .| ...|.. .... | | |.| .
IKKRGRHGLRFPFPE-HARFYMYQICCALEYCHSHGIIHRDLKPENILLDEHIKICDFGLARQL------------------------------------
KIKAQPLMQVENPDPKSTDDLPTVMKTWQFVFRGFEYAQVGSGLKPHPQHDYAS-----APETLLSNATCSS-QTDIWMLGVMIFKLLTGRDLFTSTGTP
. . ||| | . |.| .|.... .|.|. .| .
-------------------------------------------------TTFCGTPWYMAPEVL----GYGKCKCDWWSCGCILYEMLCGYPPFP-QMQM
LERFTE-------IRHILEED------------------DIPS
. . ||..|. | .
MFKKIGSPEAKDFIRKCLQKDPEKRPTAEALQDEWDIKCHPWF
|
|||||||||
| Kinase | CC1G_09673.AA | SNRK | 322-356 | 42 | 0.000523 | 8.71 | In-house | 166-200 (254) | Show / Hide |
Range on Protein: 322-356 Range on HMM: 166-200/254 Sequence Identity: 42% (15 aa) SAPETLLSNATCSSQTDIWMLGVMIFKLLTGRDLF |||| || ||| |||... |. |. | SAPEILLGDSYDAPAVDIWSLGVILYMLVCGQAPF |
|||||||||
| Kinase | CC1G_09673.AA | NAK | 329-350 | 40 | 0.000586 | 9.01 | In-house | 214-235 (299) | Show / Hide |
Range on Protein: 329-350 Range on HMM: 214-235/299 Sequence Identity: 40% (9 aa) SNATCSSQTDIWMLGVMIFKLL || . ...|||.||.|..|.. SNCPIDEKVDIWALGCMLYKMC |
|||||||||
| Kinase | CC1G_09673.AA | NKF1 | 337-352 | 56 | 0.000705 | 9.48 | In-house | 188-203 (269) | Show / Hide |
Range on Protein: 337-352 Range on HMM: 188-203/269 Sequence Identity: 56% (9 aa) TDIWMLGVMIFKLLTG .|.| .||.|| .||| HDVWQFGVLIFCCLTG |
|||||||||
| Kinase | CC1G_09673.AA | STE-Unique | 323-357 | 25 | 0.000781 | 8.84 | In-house | 516-554 (616) | Show / Hide |
Range on Protein: 323-357 Range on HMM: 516-554/616 Sequence Identity: 25% (10 aa) APETLLSN----ATCSSQTDIWMLGVMIFKLLTGRDLFT .||... . .. . ||| || |.| ...| .... CPEVINCRNQINNPYDTKVDIWSLGCMCFHMCCGCPPWH |
|||||||||