Gene CC1G_03571 (C.cinerea)

CC1G_03571

Species: C.cinerea
Alias: CC1G_03571
External Links:
Annotation:

Classification

Group: Other
Family: BUB

Sequence

Name Sequence Type Origin Length Description Download
CC1G_03571.AA Protein None 468 None Fasta, JSON
CC1G_03571.NA RNA None 1407 None Fasta, JSON
CC1G_03571.kin_dom Protein Kinase Domain None 1 None Fasta, JSON

Protein domain

Protein domains of CC1G_03571.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.

Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking.

Show/hide domain list
Domain Protein name Domain Name Range Identity (%) Significance Score Profile Source Profile Range (length) Alignment
Mad3_BUB1_I CC1G_03571.AA Mad3_BUB1_I 59-185 37 3.9e-31 110.66 SMART 1-133 (133) Show / Hide 
Range on Protein: 59-185
Range on HMM: 1-133/133
Sequence Identity: 37% (51 aa)

RNRLRINVELAL--EDEDG-DPLEAYCRLVYWTMENYPQGH-SAESGLLELLEEATRVLKDHNGGVYRGDMKYLKLWLIYASYV----ERPTIIYRFLLA
 .. | . | ..  . ..| |||. . | . || .|||||  . .|||..||| .|| ..|     |. |  |||.|. |. ..    . |  |......
LEQQRQEFEQEIQDDSYEGDDPLDVWYRYIKWTEQNYPQGQQTKQSGLQTLLERCTRYFWDDER--YKNDPRYLKIWIWYMDMCYNYFDEPREIFQYMYR

NDIGIGFALLYEEHAAVLERDGRKQEADEIYALGI
. ||   ||.||| |...|  |. |.||||| |||
HGIGTQCALFYEEWAQWYENMGNYQKADEIYQLGI
Mad3_BUB1_I CC1G_03571.AA Mad3_BUB1_I 72-185 38 2.1e-24 87.15 Pfam 18-134 (134) Show / Hide 
Range on Protein: 72-185
Range on HMM: 18-134/134
Sequence Identity: 38% (46 aa)

DEDGDPLEAYCRLVYWTMENYPQ-GHSAESGLLELLEEATRVLKDHNGGVYRGDMKYLKLWLIYASYVE----RPTIIYRFLLANDIGIGFALLYEEHAA
.|  |||. . | . |. |.||| | . .|||..||| ... ...     |. |  |||.|| |. |.      |  |....... ||   ||.||| |.
EEGDDPLQPWYRYIKWMEEAYPQGGGTKQSGLPTLLERCVKYFWHDE--RYKNDPRYLKIWLWYMNYCNNNFDEPRDIFQYMYNQGIGTKCALFYEEWAQ

VLERDGRKQEADEIYALGI
 ||. |. |.|||.. |||
YLESMGKWQKADEVFQLGI