Gene CC1G_10437 (C.cinerea)

CC1G_10437

Species: C.cinerea
Alias: CC1G_10437
External Links:
Annotation:

Classification

Group: Other
Family: FunK1

Sequence

Name Sequence Type Origin Length Description Download
CC1G_10437.AA Protein None 717 None Fasta, JSON
CC1G_10437.NA RNA None 2154 None Fasta, JSON
CC1G_10437.kin_dom Protein Kinase Domain None 326 None Fasta, JSON

Protein domain

Protein domains of CC1G_10437.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.

Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking.

Show/hide domain list
Domain Protein name Domain Name Range Identity (%) Significance Score Profile Source Profile Range (length) Alignment
Kinase CC1G_10437.AA NEK8 470-487 55 3e-06 13.8 In-house 137-154 (278) Show / Hide 
Range on Protein: 470-487
Range on HMM: 137-154/278
Sequence Identity: 55% (10 aa)

DHDILHRDISTSNILLNR
.|.|||||. | ||...|
QHNILHRDLKTQNIFMTR
Kinase CC1G_10437.AA SAK 468-488 57 0.000164 10.98 In-house 116-136 (254) Show / Hide 
Range on Protein: 468-488
Range on HMM: 116-136/254
Sequence Identity: 57% (12 aa)

LEDHDILHRDISTSNILLNRN
|  |.|.|||.. ||||| |.
LHSHGIMHRDLTLSNILLTRD
Kinase CC1G_10437.AA Type1 458-505 33 0.000257 7.17 In-house 112-155 (290) Show / Hide 
Range on Protein: 458-505
Range on HMM: 112-155/290
Sequence Identity: 33% (16 aa)

LHDTVGTHESLEDHDILHRDISTSNILLNRNPSCDRDGVIIDLDMAIR
||. .   ..     | |||| . ||.  .| .|    .| ||  |.|
LHMEIFGTQEFGKPAIAHRDIKSKNIMVKKNGQC----CIADLGLAVR
Kinase CC1G_10437.AA STKR 473-491 47 0.000258 9.58 In-house 134-152 (312) Show / Hide 
Range on Protein: 473-491
Range on HMM: 134-152/312
Sequence Identity: 47% (9 aa)

ILHRDISTSNILLNRNPSC
| |||| ..|||.... .|
IAHRDIKSKNILVKNDGTC
Kinase CC1G_10437.AA NZAK 471-488 50 0.000666 8.43 In-house 124-141 (329) Show / Hide 
Range on Protein: 471-488
Range on HMM: 124-141/329
Sequence Identity: 50% (9 aa)

HDILHRDISTSNILLNRN
| |.|||| ..|..|. |
HHIIHRDIKSNNVILDFN
Kinase CC1G_10437.AA CZAK 473-488 62 0.000808 9.93 In-house 130-145 (279) Show / Hide 
Range on Protein: 473-488
Range on HMM: 130-145/279
Sequence Identity: 62% (10 aa)

ILHRDISTSNILLNRN
||||| |..||||. .
ILHRDLSSRNILLDHS
Kinase CC1G_10437.AA Jak 468-488 42 0.000934 9.35 In-house 134-154 (299) Show / Hide 
Range on Protein: 468-488
Range on HMM: 134-154/299
Sequence Identity: 42% (9 aa)

LEDHDILHRDISTSNILLNRN
|||... |.|....|||. |.
LEDKRYIHGDVCARNILVDRE