Gene CC1G_02059 (C.cinerea)
CC1G_02059
Species: C.cinerea
Alias: CC1G_02059
External Links:
Annotation:
Sequence
| Name | Sequence Type | Origin | Length | Description | Download |
|---|---|---|---|---|---|
| CC1G_02059.AA | Protein | None | 848 | None | Fasta, JSON |
| CC1G_02059.NA | RNA | None | 2547 | None | Fasta, JSON |
| CC1G_02059.kin_dom | Protein Kinase Domain | None | 132 | None | Fasta, JSON |
Protein domains of CC1G_02059.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.
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| Domain | Protein name | Domain Name | Range | Identity (%) | Significance | Score | Profile Source | Profile Range (length) | Alignment |
|---|---|---|---|---|---|---|---|---|---|
| Kinase | CC1G_02059.AA | SCY1 | 38-169 | 16 | 4.1e-24 | 80.42 | In-house | 1-183 (337) | Show / Hide |
Range on Protein: 38-169
Range on HMM: 1-183/337
Sequence Identity: 16% (31 aa)
YTLYDGTKRDDGSPVSIFEYELS----------GRNTRALAQNALRKLRTTRHPDVLKFMDVVETDST--IHIMTERVRPLQSALSSWSTKTE-------
.....|||. .|. .|.| .. .. ... .. .| ..|||..|.. ...|.... ... .|...|| .|. |. |.
WKIHNGTKKYTGQECSVFVFDKKNIEKWHKDSWWEEICEFLKKQAKRLKRLRHPNILQYIHPLEESKDCMMYATEEIFQPLENVLKKWDNKKSCQTQKTQ
--------------------QERQDWLLWGLHPLT----FLNDPCSSTHGAFNTNAIFISPSGEWKLGG---------FELLSN
... . ||.. .. ||.. |. .|. .. .||. .|.||.|| .. ..
DVDFGQNTQPQRPYHKKDWKLDELE-VCWGIFQILDALSFLHNDCHMVHNNICPESIFVNKNGDWKIGGDDDDAGGWGMDFVCD
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| S_TKc | CC1G_02059.AA | S_TKc | 34-280 | 9 | 6.8e-05 | -105.14 | SMART | 1-231 (231) | Show / Hide |
Range on Protein: 34-280
Range on HMM: 1-231/231
Sequence Identity: 9% (28 aa)
FDTIYTL--------YDGTKRDDGSPV---SIFEYELSGRNTRALAQNALRKLRTTRHPDVLKFMDVVETDSTIHIMTERVR----PLQSALSSWST---
.. . .. | ......| | | ... .. |. .|| . |. || .. . ... .| . | . . . .
YEILRKIGKGAFGKVYKCRHKKTGRIVAIKIIK----------EHIRREIQILKK-HHPNIVKLYDVFQD-DHLYMVMEYCDGDLGDLFDYIKKRGRHGL
---KTEQERQDWLLWGLHPLTFLNDPC-----------------------SSTHGAFNTNAIFISPSGEWKLGGFELLSNPKDDAAVLYTSASLLPGSMN
.| . . .. . | .. . .... . . |. .
RFPFPE-HARFYMYQICCALEYCHSHGIIHRDLKPENILLDEHIKICDFGLARQL-------------------------------------TTFCGTPW
TAPPEVKKSGWSTLKQHDVAAADAYALGLLLHTLFN-----PSHPPPATAQPPHPPPPASSRGSIPLPIFPLFKKLLTPNPATRATPKHFLE-------V
.||| ... ...| ...| .| .. | . .. . . . . .|.|. .|. | | |.
YMAPEVL--------GYGKCKCDWWSCGCILYEMLCGYPPFP--QMQMMFKKIG-----------SPEAKDFIRKCLQKDPEKRPTA-EALQDEWDIKCH
GMT
PWF
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| HEAT | CC1G_02059.AA | HEAT | 369-399 | 25 | 2.368862 | 5.08 | Pfam | 1-31 (31) | Show / Hide |
Range on Protein: 369-399 Range on HMM: 1-31/31 Sequence Identity: 25% (8 aa) IVDPIVKLYSSPDRGTRMALLDHLPQYIDKL |.....|. ..|| |.| . | | .... ILPHLLKCLNDPDWEVREAACWCLGQLCEHC |
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| HEAT | CC1G_02059.AA | HEAT | 408-438 | 25 | 7.3e-05 | 20.7 | Pfam | 1-31 (31) | Show / Hide |
Range on Protein: 408-438 Range on HMM: 1-31/31 Sequence Identity: 25% (8 aa) IFPHLQTGFADTVAVIREATVRSISSFAPKL |.||| ... |... .|||............ ILPHLLKCLNDPDWEVREAACWCLGQLCEHC |
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| HEAT | CC1G_02059.AA | HEAT | 447-477 | 32 | 0.001131 | 16.58 | Pfam | 1-31 (31) | Show / Hide |
Range on Protein: 447-477 Range on HMM: 1-31/31 Sequence Identity: 32% (10 aa) LLRLLAKMQVDPEPSIRTNTCILLGRLGPTL .| .| |. ||....| ..| ||.| . . ILPHLLKCLNDPDWEVREAACWCLGQLCEHC |
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| HEAT | CC1G_02059.AA | HEAT | 486-516 | 19 | 0.035671 | 11.39 | Pfam | 1-31 (31) | Show / Hide |
Range on Protein: 486-516 Range on HMM: 1-31/31 Sequence Identity: 19% (6 aa) LVPAFSRALKDSFVHARVAALMAFTATIDCF ..|.. ..|.|. . | ||. .... .... ILPHLLKCLNDPDWEVREAACWCLGQLCEHC |
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| HEAT | CC1G_02059.AA | HEAT | 525-555 | 22 | 0.326573 | 8.06 | Pfam | 1-31 (31) | Show / Hide |
Range on Protein: 525-555 Range on HMM: 1-31/31 Sequence Identity: 22% (7 aa) VIPNMSFALIDREKVVRDQAFKTLDLYVKKL ..| . .| | . ||..|...| .... ILPHLLKCLNDPDWEVREAACWCLGQLCEHC |
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