Species: C.cinerea
Alias: CC1G_05344
External Links:


Group: PKL
Family: CAK
Subfamily: Fmp29-like


Name Sequence Type Origin Length Description Download
CC1G_05344.AA Protein None 705 None Fasta, JSON
CC1G_05344.NA RNA None 2118 None Fasta, JSON
CC1G_05344.kin_dom Protein Kinase Domain None 364 None Fasta, JSON

Protein domain

Protein domains of CC1G_05344.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.

Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking.

Domain Protein name Domain Name Range Identity (%) Significance Score Profile Source Profile Range (length) Alignment
APH CC1G_05344.AA APH 372-398 27 0.001207 13.31 Pfam 176-204 (248) Show / Hide
Range on Protein: 372-398
Range on HMM: 176-204/248
Sequence Identity: 27% (8 aa)

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APH CC1G_05344.AA APH 433-492 25 0.000485 14.66 Pfam 148-204 (248) Show / Hide
Range on Protein: 433-492
Range on HMM: 148-204/248
Sequence Identity: 25% (16 aa)

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