Gene NME6 (Mouse)

NME6

Species: Mouse
Alias: NME6
External Links:
Annotation:

Classification

Group: NDK
Family: NDK

Sequence

Name Sequence Type Origin Length Description Download
NME6.AA Protein None 189 None Fasta, JSON
NME6.NA RNA None 1025 None Fasta, JSON
NME6.kin_dom Protein Kinase Domain None 135 None Fasta, JSON

Protein domain

Protein domains of NME6.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.

Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking.

Show/hide domain list
Domain Protein name Domain Name Range Identity (%) Significance Score Profile Source Profile Range (length) Alignment
NDK NME6.AA NDK 11-152 41 2.8e-68 234.07 SMART 1-142 (142) Show / Hide 
Range on Protein: 11-152
Range on HMM: 1-142/142
Sequence Identity: 41% (60 aa)

LQLTLALIKPDAVAHPLILEAVHQQILSNKFLIVRTRELQWKLEDCRRFYR-EHEGRFFYQRLVEFMTSGPIRAYILAHKDAIQLWRTLMGPTRVFRARY
.. |...||||||.. || | ... . .  | ||  ...|.  |... .|  ||.|. |...|||||||||. |.......||. |||.|||| ..... 
MERTFIMIKPDAVQRGLIGEIISRFERK-GFKIVAMKMMQLTKEQAEEHYAVEHKGKPFFNDLVEFMTSGPVVAMVWEGENAIKTWRTMMGPTNPEVPKE

IAPDSIRGSLGLTDTRNTTHGSDSVVSASREIAAFFPDFSEQR
 ||..||| .|....||..|||||. || |||| .||... . 
AAPGTIRGDFGTDIGRNIVHGSDSPESAEREIAYWFPESEICE
NDK NME6.AA NDK 12-148 39 5.4e-42 150.64 Pfam 1-140 (140) Show / Hide 
Range on Protein: 12-148
Range on HMM: 1-140/140
Sequence Identity: 39% (56 aa)

QLTLALIKPDAVAHPLILEAVHQQILSNKFLIVRTRELQWKLEDCRRFYREHEGRFFYQRLVEFMTSGPIRAYILAHKDAIQLWRTLMGPTRVFRARYIA
. |...||||||.  ||   . ...  . | ||  . ..   | ....| ||.|. |.. |||||||||. | ..  ..||  ||..||.|    |. .|
ERTFIMIKPDAVQRGLI-GEIISRFERKGFKIVAMKMMHLTREQAEEHYAEHKGKPFFPDLVEFMTSGPVVAMVWEGENAIKKWREMMGATNPAEAK-EA

PDSIRGSLGLTD--TR-NTTHGSDSVVSASREIAAFFP--DF
|..|||  ...   .| |  |||||. || |||| .||  ..
PGTIRGDFAVSIYPGRRNVVHGSDSPESAEREIAFWFPPEEI