Gene CAMK1c-S5_u (S.moellendorffii)
CAMK1c-S5_u
Species: S.moellendorffii
Alias: CAMK1c-S5_u
External Links:
Annotation:
Sequence
| Name | Sequence Type | Origin | Length | Description | Download |
|---|---|---|---|---|---|
| CAMK1c-S5_u.AA | Protein | None | 328 | None | Fasta, JSON |
| CAMK1c-S5_u.NA | RNA | None | 987 | None | Fasta, JSON |
| CAMK1c-S5_u.kin_dom | Protein Kinase Domain | None | 172 | None | Fasta, JSON |
Protein domains of CAMK1c-S5_u.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.
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| Domain | Protein name | Domain Name | Range | Identity (%) | Significance | Score | Profile Source | Profile Range (length) | Alignment |
|---|---|---|---|---|---|---|---|---|---|
| Kinase | CAMK1c-S5_u.AA | Aur | 140-172 | 39 | 5e-17 | 40.97 | In-house | 225-257 (257) | Show / Hide |
Range on Protein: 140-172 Range on HMM: 225-257/257 Sequence Identity: 39% (13 aa) PLSDEVEDFICGMLAVEPSERLMLDGVLDHPWI ..|.|. |.|.. | ..|..|. || .. |||| HISKEAKDLISKILQHDPKQRMTLDQIMNHPWI |
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| Pkinase | CAMK1c-S5_u.AA | Pkinase | 3-115 | 25 | 2.3e-14 | 51.9 | Pfam | 79-196 (293) | Show / Hide |
Range on Protein: 3-115 Range on HMM: 79-196/293 Sequence Identity: 25% (33 aa) MELCGP-----SLWHRLI--KGGPL--GEKVAAKTIQRLAEALKGIHTSGIVHRNLKPKNIFVKLDALAV----HDGDFGVA----TDDPKEMSQYCGTG ||.|. .|.... ..|.. |... . . ....|. .| ||.|| ||| ||... . . . .|||.| . |. .||| MEYCEGGLYVMDLFDYISTWRHGCFYFSEWECKFYMYQILRGLEYCHSMGIIHRDLKPENILID-NNGHIDACVKICDFGLAKQFDY-NNS-MTTFCGTP KYMAPGTTSCKSGHGDSRLQ--SFYTTAIDMW |||| .. . |....||| WYMAPEV-----------IRGGQYYGPKVDMW |
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| Kinase | CAMK1c-S5_u.AA | CAMK | 3-90 | 19 | 3.2e-14 | 41.54 | In-house | 136-289 (425) | Show / Hide |
Range on Protein: 3-90 Range on HMM: 136-289/425 Sequence Identity: 19% (30 aa) M---ELCGP-----SLWHRLIKGGP---------------LGEKVAAKTIQRLAEALKGIHTSGIVHRNLKPKNIFVKLDA----------------LAV | |.| | .... |. . |. |.. .. ...|.. .| .|||| ||| || . . . MEIMEYCSGGELFDDLFDYIVEHGCYGEEFDQFDIVERGRFTEREARRYFRQICSAVHYCHSHNIVHRDLKPENILLDDNNDDSDPVEHDEIFDWNNNNI HDGDFGVATDDPK--------------------------EMSQYCGTGKYMA-P ||| |. .. |. .||| ||| | KIIDFGFANKFDPGENNFMCSDYKGGEMHNQWTTPTEGQKMKTFCGTPEYMAAP |
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| Kinase | CAMK1c-S5_u.AA | CAMK | 135-172 | 36 | 1.8e-12 | 35.76 | In-house | 390-425 (425) | Show / Hide |
Range on Protein: 135-172 Range on HMM: 390-425/425 Sequence Identity: 36% (14 aa) FPDGCPLSDEVEDFICGMLAVEPSERLMLDGVLDHPWI | .|.|. |.|..|| |.|..|. .. .|.|||. F-HH-FVSQECKDLIRKMLQVDPEKRMTIEQCLNHPWM |
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| Kinase | CAMK1c-S5_u.AA | Ciliate-E2-Unclassified | 10-90 | 21 | 1.4e-11 | 36.48 | In-house | 125-235 (352) | Show / Hide |
Range on Protein: 10-90 Range on HMM: 125-235/352 Sequence Identity: 21% (24 aa) LWHRLIKGGPLGEKVAA-----KTIQRLAEALKGIHTSG-IVHRNLKPKNIFVKLDAL--AVHDGDFGVAT---DD---------------PKEMSQYCG | |.. .. . |. |. . . . ..|. .| .. |.||..|| ||... . . ||| . .. ...|.. || LFHNMKQRKIFTEQQAKYKKAKFYFAQILQGLEYLHHKNNIIHRDIKPENILFDNNGKNYYIKIIDFGISKKYQQNNNCDTNQQQKMQIWKQQMMWTFCG TGKYM----AP | || || TPNYMPQYTAP |
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| Kinase | CAMK1c-S5_u.AA | CAMK1 | 142-172 | 46 | 1.8e-11 | 29.57 | In-house | 245-276 (276) | Show / Hide |
Range on Protein: 142-172 Range on HMM: 245-276/276 Sequence Identity: 46% (15 aa) SDE-VEDFICGMLAVEPSERLMLDGVLDHPWI ||. . |||..|| |.|..|. . .|.|||| SDQEAKDFIKHMLEVDPKKRYTCEQCLNHPWI |
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| Kinase | CAMK1c-S5_u.AA | Ciliate-E2 | 3-115 | 18 | 2.2e-10 | 31.82 | In-house | 113-280 (365) | Show / Hide |
Range on Protein: 3-115 Range on HMM: 113-280/365 Sequence Identity: 18% (34 aa) MELC-GPSLWHRLI------------KGGPLGEKVAAKTIQRLAE---------------ALKGIHTSG-IVHRNLKPKNIFVKLDALAVHDGDFGVAT- ||.| | .|..... . ... || ... .. ... ||. .| . |.||..|| ||.. . ||| .. MEYCQGGDLFDYIKNNKKKRNHEIEKD-KYFTEKEIKYIMKQILQGFKTKAEFYIACIILALEYLHSKNNIIHRDIKPENILF------IKIIDFGLSKK -DDPKEMSQY--------------------------------CGTGKYMAP----GTTSCKSGHGDSRLQSFYTTAIDMW ||. .. .. ||| |||| | . .| |....|.| YDDDNQNRTHKQQCKWYMFKNDTSRTPGYMDQIIQQNMFNTICGTPGYMAPEILNGKKYDNQ-----QKQKGYDYKCDIW |
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| Kinase | CAMK1c-S5_u.AA | ULK | 134-172 | 28 | 2.6e-10 | 32.83 | In-house | 283-324 (324) | Show / Hide |
Range on Protein: 134-172 Range on HMM: 283-324/324 Sequence Identity: 28% (12 aa) EFPDGC---PLSDEVEDFICGMLAVEPSERLMLDGVLDHPWI .||... ..|.|..|.| .|| .....| . ...|||. QFPKPPKDPKISPECKDLIRRMLQYDEKDRISWEEIFNHPWF |
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| S_TKc | CAMK1c-S5_u.AA | S_TKc | 1-172 | 19 | 2.8e-10 | -26.09 | SMART | 1-231 (231) | Show / Hide |
Range on Protein: 1-172
Range on HMM: 1-231/231
Sequence Identity: 19% (50 aa)
MM---------------------------------------------------------------MELCGP---SLWHRLIKGGP------LGEKVAAKT
||.|. .| ... | |. . | .|..
YEILRKIGKGAFGKVYKCRHKKTGRIVAIKIIKEHIRREIQILKKHHPNIVKLYDVFQDDHLYMVMEYCDGDLGDLFDYIKKRGRHGLRFPFPE-HARFY
IQRLAEALKGIHTSGIVHRNLKPKNIFVKLDALAVHDGDFGVATDDPKEMSQYCGTGKYMAPGTTSCKSGHGDSRLQSFYTT-AIDMW-------ELLRG
.. ...||. .| ||.|| ||| ||.. . .|||.|. . .||| |||| |.. ..|.| |.| |
MYQICCALEYCHSHGIIHRDLKPENILLDE---HIKICDFGLARQL----TTFCGTPWYMAPEVL-------------GYGKCKCDWWSCGCILYEMLCG
YK--QSREIELLRAGEFPDGCPLSDEVEDFICGMLAVEPSERLMLDGVLD-------HPWI
| . . .... |.|. |||...| ..|..|. .| |||.
YPPFP-QMQMMFKKIG-------SPEAKDFIRKCLQKDPEKRPTA-EALQDEWDIKCHPWF
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| Kinase | CAMK1c-S5_u.AA | CAMK-Unique | 29-107 | 27 | 4.4e-10 | 29.26 | In-house | 163-255 (363) | Show / Hide |
Range on Protein: 29-107 Range on HMM: 163-255/363 Sequence Identity: 27% (27 aa) IQRLAEALKGIHTSGIVHRNLKPKNIFVKLD---------------ALAVHDGDFGVATDDP---KE--MSQYCGTGKYMAPGTTSCKSGHGDSRLQSF .|.|..|.. | .||||.||. || |. .. . ||| ... .. |. .||| |||| || |.. MQCLLSAVAYMHSQDIVHRDLKLENIMVCYSFKDNNHHRDFPYDWSNWHIKLCDFGLCCHYNHNKMCHMMQTMCGTPCYMAPEIVFCKN------YQEM |
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| Kinase | CAMK1c-S5_u.AA | DCAMKL | 22-90 | 34 | 5.9e-10 | 26.6 | In-house | 114-188 (279) | Show / Hide |
Range on Protein: 22-90 Range on HMM: 114-188/279 Sequence Identity: 34% (26 aa) EKVAAKTIQRLAEALKGIHTSGIVHRNLKPKNIFVKL---DALAVHDGDFGVATDDPK---EMSQYCGTGKYMAP |. || . |..||| .| .|||| .|| | |. . . .||| |. .. .. ||| | || ERDAAIMMTCLCKALKYLHEMNIVHRDIKPENLLVCKHEDGEKSLKLCDFGLACHVNGDFGPLYTVCGTPTYVAP |
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| Kinase | CAMK1c-S5_u.AA | ULK | 134-172 | 28 | 1.6e-09 | 29.49 | In-house | 288-329 (329) | Show / Hide |
Range on Protein: 134-172 Range on HMM: 288-329/329 Sequence Identity: 28% (12 aa) EFP---DGCPLSDEVEDFICGMLAVEPSERLMLDGVLDHPWI .|| .. ..|.|..|.| .|| .....| . ...|||. QFPKDGNDPQISPECKDLIRRMLQYDEKDRISWEELFNHPWF |
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| Kinase | CAMK1c-S5_u.AA | CAMKL | 123-172 | 23 | 5.7e-09 | 24.61 | In-house | 249-297 (297) | Show / Hide |
Range on Protein: 123-172 Range on HMM: 249-297/297 Sequence Identity: 23% (12 aa) QSREIELLRAGEFPDGCP--LSDEVEDFICGMLAVEPSERLMLDGVLDHPWI . .. . . | . . . .| ...|.| .|| | |..| .. .. ||| I-YLYWKIMCG-YYPPIWYHVS-DCRDLIRKMLQVNPEKRPTIHQIMNHPWM |
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| Kinase | CAMK1c-S5_u.AA | DCAMKL | 142-172 | 38 | 2.5e-08 | 21.45 | In-house | 249-279 (279) | Show / Hide |
Range on Protein: 142-172 Range on HMM: 249-279/279 Sequence Identity: 38% (12 aa) SDEVEDFICGMLAVEPSERLMLDGVLDHPWI || ..| | || |.| | ...|||. SDSAKDLISHMLQVDPEKRYTAEQIMQHPWV |
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| Kinase | CAMK1c-S5_u.AA | ULK | 32-90 | 26 | 2.4e-07 | 21.79 | In-house | 139-220 (329) | Show / Hide |
Range on Protein: 32-90 Range on HMM: 139-220/329 Sequence Identity: 26% (23 aa) LAEALKGIHTSGIVHRNLKPKNIFVKLDA---------------LAVHDGDFGVATD-DPK------EMSQY-----CGTGKYMAP .....| .| .|.|| .|| || .. . .| ||| | | .|.. ||| |||| ILNGFKELHKHNIIHRDIKPQNILIHNGQPKTDSKKVHPNGVLKIA----DFGFAKHVDNDNMEQQMMMTCVNEKRLCGTPLYMAP |
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| Kinase | CAMK1c-S5_u.AA | Ciliate-E2 | 141-172 | 32 | 2.9e-07 | 20.99 | In-house | 329-365 (365) | Show / Hide |
Range on Protein: 141-172 Range on HMM: 329-365/365 Sequence Identity: 32% (12 aa) LSDEVEDFICG----MLAVEPSERLM-LDGVLDHPWI .|.|. |.| || ..|..|. . .|.|||. WSQECKDLIKKFGKRMLQKDPEKRITGWEQILNHPWF |
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| Kinase | CAMK1c-S5_u.AA | CAMK1 | 22-54 | 42 | 7.3e-07 | 15.92 | In-house | 107-139 (276) | Show / Hide |
Range on Protein: 22-54 Range on HMM: 107-139/276 Sequence Identity: 42% (14 aa) EKVAAKTIQRLAEALKGIHTSGIVHRNLKPKNI || |..... ...|.. .| ||||| ||| |. EKDARHIMKQILSAVEYMHSKGIVHRDLKPENL |
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| Kinase | CAMK1c-S5_u.AA | Ciliate-E2-Unclassified | 141-172 | 36 | 7.8e-07 | 19.77 | In-house | 317-352 (352) | Show / Hide |
Range on Protein: 141-172 Range on HMM: 317-352/352 Sequence Identity: 36% (13 aa) LSDEVEDFIC----GMLAVEPSERLMLDGVLDHPWI .|.|..||| || . |..|. .. .| |||. WSPEAKDFINDLLQKMLKKNPNKRITFEQILNHPWF |
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| Kinase | CAMK1c-S5_u.AA | CAMKL | 3-90 | 27 | 2e-06 | 16.65 | In-house | 100-202 (297) | Show / Hide |
Range on Protein: 3-90 Range on HMM: 100-202/297 Sequence Identity: 27% (28 aa) MELCGPS---LWHRLIKG----GPLGEKVAAKTIQRLAEALKGIHTSGIVHRNLKPKNIFVKLDAL-AVHDGDFGVAT--DD-----PKEMSQYCGTGKY ||.|. | ....| |.. |. | . . . .|.. .| ||||| .|| || . . . ||| .. .. . .. ||. | MEYCSGGEMDLFDYIVKHGHRRGRMPEHEARRYFRQIVSAVNYCHSHGIVHRDIKPENILLDENGNNNIKIIDFGFSNMYRPCIFGPGQKLKTFCGSPPY MAP ||| MAP |
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| Kinase | CAMK1c-S5_u.AA | ULK | 32-90 | 24 | 2e-06 | 19.28 | In-house | 135-216 (324) | Show / Hide |
Range on Protein: 32-90 Range on HMM: 135-216/324 Sequence Identity: 24% (21 aa) LAEALKGIHTSGIVHRNLKPKNIFVKLDA---------------LAVHDGDFGVATD-DP-----KEMSQYC------GTGKYMAP .....| .| .|.|| .|| || .. . .| ||| | | . ... || |||| ICNGFKELHKHNIIHRDIKPQNILIHNGQPKTDSKKVHPNGVLKIA----DFGFAKHVDNNNMEQQMCQTCVNEKRIKGTPLYMAP |
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| Kinase | CAMK1c-S5_u.AA | Pkinase | 134-172 | 25 | 1.1e-05 | 21.17 | Pfam | 238-293 (293) | Show / Hide |
Range on Protein: 134-172 Range on HMM: 238-293/293 Sequence Identity: 25% (14 aa) EFPDGCPLS-----------------DEVEDFICGMLAVEPSERLMLDGVLDHPWI ..| |. | .| |||...|.. |..|. . .| |||. DWPWWCSISYFFFRHWHFHWTFHNWSEECKDFIKWCLCKDPKKRPTAEQILQHPWF |
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| Kinase | CAMK1c-S5_u.AA | CAMK-Unique | 142-172 | 35 | 4.3e-05 | 12.52 | In-house | 333-363 (363) | Show / Hide |
Range on Protein: 142-172 Range on HMM: 333-363/363 Sequence Identity: 35% (11 aa) SDEVEDFICGMLAVEPSERLMLDGVLDHPWI |.| ||. . . |.|. |. . |.|.|| SQEAKDFVKCCMTVDPDHRWSAKELLEHQWI |
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| Kinase | CAMK1c-S5_u.AA | Aur | 22-54 | 42 | 0.008486 | 2.65 | In-house | 100-132 (257) | Show / Hide |
Range on Protein: 22-54 Range on HMM: 100-132/257 Sequence Identity: 42% (14 aa) EKVAAKTIQRLAEALKGIHTSGIVHRNLKPKNI |. ||| .. ...||. | .|.|| .|| || EQRAAKYMYQICNALDYCHSKNIIHRDIKPENI |
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| Kinase | CAMK1c-S5_u.AA | CAMK1 | 78-115 | 36 | 0.092059 | 0.83 | In-house | 170-200 (276) | Show / Hide |
Range on Protein: 78-115 Range on HMM: 170-200/276 Sequence Identity: 36% (14 aa) MSQYCGTGKYMAPGTTSCKSGHGDSRLQSFYTTAIDMW |.. ||| |.|| ||. .| |.||| MKTACGTPGYVAPEVLECKK-------DKPYDKACDMW |
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