Gene CAMK1c-S5_ad (S.moellendorffii)

CAMK1c-S5_ad

Species: S.moellendorffii
Alias: CAMK1c-S5_ad
External Links:
Annotation:

Classification

Group: CAMK
Family: CAMK1
Subfamily: CAMK1c

Sequence

Name Sequence Type Origin Length Description Download
CAMK1c-S5_ad.AA Protein None 169 None Fasta, JSON
CAMK1c-S5_ad.NA RNA None 510 None Fasta, JSON
CAMK1c-S5_ad.kin_dom Protein Kinase Domain None 111 None Fasta, JSON

Protein domain

Protein domains of CAMK1c-S5_ad.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.

Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking.

Show/hide domain list
Domain Protein name Domain Name Range Identity (%) Significance Score Profile Source Profile Range (length) Alignment
Kinase CAMK1c-S5_ad.AA AGC 33-130 23 1.1e-29 72.6 In-house 266-395 (395) Show / Hide 
Range on Protein: 33-130
Range on HMM: 266-395/395
Sequence Identity: 23% (34 aa)

CG--TGKYMAPEVTSCKDDHGDARLQSFYTTSMDVWA--LGVIAYELLRG----YKQSR---------EIELLQARE-------FPDGCP----------
||  |  |||||.               |. . | |.  ||.. ||.| |    | ...         . |. |  .       ..   |          
CGPCTPEYMAPEIL--------------YGKACDWWSFGLGCLMYEMLTGYPPFYGDNPQENRHPFRNPMEMFQKIMNGRYFINWKVKFPFPEDPQFPED

--LSDEAEDLICGMLAVEPSERLT----------LDGVLEHPWI
  .|.|| ||| ..| ..|..||.           . . .||| 
RWFSPEAKDLIKKLLCKDPEKRLGCGGNDFGDKGAEEIKNHPWF
Kinase CAMK1c-S5_ad.AA CAMK 23-130 22 1.8e-22 68.62 In-house 270-425 (425) Show / Hide 
Range on Protein: 23-130
Range on HMM: 270-425/425
Sequence Identity: 22% (36 aa)

TDDPKEMSQCCGTGKYMA-PEVTSC--KDDHGDARL----QSFYTTSMDVWALGVIAYELLRGY------KQSREIE-------------LLQAREFP-D
... . |. .|||  ||| ||| .   ... .        .  |. . |.|..||| | .| ||      ......|               .. ..  .
PTEGQKMKTFCGTPEYMAAPEVLNGKGHCNMQ-N-ATDEEKPYYGPKCDMWSCGVILYIMLCGYPPFYGDCDNEICEDEWIGMNDYELFEKIMKGKYDFP

GCP-----------------------LSDEAEDLICGMLAVEPSERLTLDGVLEHPWI
  .                       .|.|. |||..|| |.|..|.|.. .|.|||.
PPYFSPISCNYGPEWWDDISDEFHHFVSQECKDLIRKMLQVDPEKRMTIEQCLNHPWM
Kinase CAMK1c-S5_ad.AA Ciliate-E2 31-130 30 1.6e-19 63.66 In-house 246-365 (365) Show / Hide 
Range on Protein: 31-130
Range on HMM: 246-365/365
Sequence Identity: 30% (37 aa)

QCCGTGKYMAPEVTSCKDDHGDARLQSFYTTSMDVWALGVIAYELLRGYK-QSREIELLQAREFP----------------DGCPLSDEAEDLICG----
..|||  |||||. . |.. ..  .|  |... |.|.|||| ||.| |.     .. . .  .||                .   .|.|. |||      
TICGTPGYMAPEILNGKKYDNQ-QKQKGYDYKCDIWSLGVILYEMLFGKPPF-QQQIKQCKIDFPCPEWQKDTQCIQCKWKSWKKWSQECKDLIKKFGKR

MLAVEPSERLT-LDGVLEHPWI
|| ..|..|.|  . .|.|||.
MLQKDPEKRITGWEQILNHPWF
Pkinase CAMK1c-S5_ad.AA Pkinase 20-130 23 3e-19 69.15 Pfam 157-293 (293) Show / Hide 
Range on Protein: 20-130
Range on HMM: 157-293/293
Sequence Identity: 23% (35 aa)

GVA----TDDPKEMSQCCGTGKYMAPEVTSCKDDHGDARLQ--SFYTTSMDVWALGVIAYELLRG---YKQS------REIELLQAREF-------PDGC
|.|    .     |.  |||  ||||||           ..  . |... |.|..|.| ||.| |   ....      ....... .         |  |
GLAKQFDY-NNS-MTTFCGTPWYMAPEV-----------IRGGQYYGPKVDMWSCGCILYEMLCGRPPFPGHCWHDNHDQMQMICRIMGPPLHFDWPWWC

PLS-----------------DEAEDLICGMLAVEPSERLTLDGVLEHPWI
. |                 .|. |.|...|.. |..|.| . .|.|||.
SISYFFFRHWHFHWTFHNWSEECKDFIKWCLCKDPKKRPTAEQILQHPWF
Kinase CAMK1c-S5_ad.AA Aur 98-130 48 3.2e-19 46.87 In-house 225-257 (257) Show / Hide 
Range on Protein: 98-130
Range on HMM: 225-257/257
Sequence Identity: 48% (16 aa)

PLSDEAEDLICGMLAVEPSERLTLDGVLEHPWI
..|.|| |||.. | ..|..|.||| ...||||
HISKEAKDLISKILQHDPKQRMTLDQIMNHPWI
Kinase CAMK1c-S5_ad.AA CAMKL 29-130 26 1.5e-16 49.2 In-house 190-297 (297) Show / Hide 
Range on Protein: 29-130
Range on HMM: 190-297/297
Sequence Identity: 26% (31 aa)

MSQCCGTGKYMAPEVTSC--KDDHGDARLQSFYTTSMDVWALGVIAYELLRGY---KQS------------REIELLQAREFPDGCPLSDEAEDLICGML
.. .||.  |||||. .   |. .| .          |.|..||| | .. ||   ..             ....  .  ..|  . .| ...||| .||
LKTFCGSPPYMAPEIFQGNNKPYDGPK---------VDIWSCGVILYAMVCGYLPFDDDTYNKQGKDNIYLYWKIMCG-YYPPIWYHVS-DCRDLIRKML

AVEPSERLTLDGVLEHPWI
 | |..| |.. ...||| 
QVNPEKRPTIHQIMNHPWM
Kinase CAMK1c-S5_ad.AA ULK 24-130 23 3.7e-16 52.96 In-house 198-329 (329) Show / Hide 
Range on Protein: 24-130
Range on HMM: 198-329/329
Sequence Identity: 23% (33 aa)

DDPKEMSQC-----CGTGKYMAPEVTS----CKDDHGDARLQSFYTTS-MDVWALGVIAYELLRGY-----KQSRE-I-----ELLQA------------
..  .|..      |||  ||||.. .    .|.          |...  |.| ||.| ||.| |.        .. .     .|..             
EQQMMMTCVNEKRLCGTPLYMAPQILQGQGEQKP----------YYDYKCDIWSLGCIFYEMLYGKPPFYAW-FNDQYLQIIQKLINNPPPWPQQIKKQP

REFP---DGCPLSDEAEDLICGMLAVEPSERLTLDGVLEHPWI
 .||   .. ..|.| .||| .|| .....| . . ...|||.
LQFPKDGNDPQISPECKDLIRRMLQYDEKDRISWEELFNHPWF
Kinase CAMK1c-S5_ad.AA RAD53 100-130 54 1.3e-14 39.4 In-house 275-305 (305) Show / Hide 
Range on Protein: 100-130
Range on HMM: 275-305/305
Sequence Identity: 54% (17 aa)

SDEAEDLICGMLAVEPSERLTLDGVLEHPWI
|.|| ||| .|| |.| .|.| |..| |||.
SEEAKDLIKWMLCVDPEKRYTIDEALNHPWM
Kinase CAMK1c-S5_ad.AA CAMK1 100-130 50 1.3e-14 38.8 In-house 245-276 (276) Show / Hide 
Range on Protein: 100-130
Range on HMM: 245-276/276
Sequence Identity: 50% (16 aa)

SDE-AEDLICGMLAVEPSERLTLDGVLEHPWI
||. | |.|..|| |.|..|.| . .|.||||
SDQEAKDFIKHMLEVDPKKRYTCEQCLNHPWI
Kinase CAMK1c-S5_ad.AA MAPKAPK 100-130 51 1.7e-12 34.53 In-house 262-292 (292) Show / Hide 
Range on Protein: 100-130
Range on HMM: 262-292/292
Sequence Identity: 51% (16 aa)

SDEAEDLICGMLAVEPSERLTLDGVLEHPWI
|.|| |||  .| ..|..|||   |..||||
SEEAKDLIRKLLRRDPTQRLTIEQVMNHPWI
Kinase CAMK1c-S5_ad.AA CAMK1 29-79 43 3.5e-10 25.74 In-house 170-213 (276) Show / Hide 
Range on Protein: 29-79
Range on HMM: 170-213/276
Sequence Identity: 43% (22 aa)

MSQCCGTGKYMAPEVTSCKDDHGDARLQSFYTTSMDVWALGVIAYELLRGY
|...|||  |.||||  ||          .|  . |.|  ||| | || ||
MKTACGTPGYVAPEVLECKK-------DKPYDKACDMWSIGVITYILLCGY
Kinase CAMK1c-S5_ad.AA Ciliate-E2-Unclassified 99-130 38 2.9e-09 28.31 In-house 317-352 (352) Show / Hide 
Range on Protein: 99-130
Range on HMM: 317-352/352
Sequence Identity: 38% (14 aa)

LSDEAEDLIC----GMLAVEPSERLTLDGVLEHPWI
.|.||.|.|      || . |..|.|.. .|.|||.
WSPEAKDFINDLLQKMLKKNPNKRITFEQILNHPWF
Kinase CAMK1c-S5_ad.AA Ciliate-E2-Unclassified 25-79 40 8.3e-09 26.71 In-house 215-267 (352) Show / Hide 
Range on Protein: 25-79
Range on HMM: 215-267/352
Sequence Identity: 40% (24 aa)

DPKEMSQCCGTGKYM----APEVT-SCKDDHGDARLQSFYTTSMDVWALGVIAYELLRGY
....|...|||  ||    ||||  ... ||  |        . |.|.||||.||.| ||
KQQMMWTFCGTPNYMPQYTAPEVLQGQNYDHSKA-------YKCDIWSLGVILYEMLFGY
Kinase CAMK1c-S5_ad.AA Aur 64-79 56 7.9e-07 13.51 In-house 183-198 (257) Show / Hide 
Range on Protein: 64-79
Range on HMM: 183-198/257
Sequence Identity: 56% (9 aa)

DVWALGVIAYELLRGY
|.|.|||..|||. |.
DIWCLGVLCYELCHGC
Kinase CAMK1c-S5_ad.AA MAPKAPK 33-79 42 2e-06 15.13 In-house 175-215 (292) Show / Hide 
Range on Protein: 33-79
Range on HMM: 175-215/292
Sequence Identity: 42% (20 aa)

CGTGKYMAPEVTSCKDDHGDARLQSFYTTSMDVWALGVIAYELLRGY
|.|  ||||||             ..|  | | | |||| | .| ||
CYTPYYMAPEVVGAFK------EAHTYDKSCDMWSLGVIMYIMLCGY
Kinase CAMK1c-S5_ad.AA RAD53 33-80 37 6e-06 13.21 In-house 187-239 (305) Show / Hide 
Range on Protein: 33-80
Range on HMM: 187-239/305
Sequence Identity: 37% (20 aa)

CGTGKYMAPEVTSCK-----DDHGDARLQSFYTTSMDVWALGVIAYELLRGYK
|||  | ||||   |     . .. .  |  || . |.| .|.| | .| ||.
CGTPQYVAPEVITSKGHNCYHENEERQVQVGYTKKVDCWSMGCILYICLCGYP
S_TKc CAMK1c-S5_ad.AA S_TKc 4-130 14 1.4e-05 -95.09 SMART 17-231 (231) Show / Hide 
Range on Protein: 4-130
Range on HMM: 17-231/231
Sequence Identity: 14% (35 aa)

KNLNRS-----------------------------------------------QC-------ALRANAA-------------------------------
|  ...                                                         .. .                                 
KCRHKKTGRIVAIKIIKEHIRREIQILKKHHPNIVKLYDVFQDDHLYMVMEYCDGDLGDLFDYIKKRGRHGLRFPFPEHARFYMYQICCALEYCHSHGII

-------------------LGVATDDPKEMSQCCGTGKYMAPEVTSCKDDHGDARLQSFYTT-SMDVWALGVIAYELLRGYK----QSREIELLQAREFP
                    |.|.      . .|||  ||||||               |.. . |.|..|.| ||.| ||     . . ....      
HRDLKPENILLDEHIKICDFGLARQL----TTFCGTPWYMAPEVL-------------GYGKCKCDWWSCGCILYEMLCGYPPFPQMQMMFKKIG-----

DGCPLSDEAEDLICGMLAVEPSERLTLDGVLE-------HPWI
     |.|| |.|...| ..|..|.|   .|.       |||.
-----SPEAKDFIRKCLQKDPEKRPTA-EALQDEWDIKCHPWF