Gene CAMK1c-S5_v (S.moellendorffii)

CAMK1c-S5_v

Species: S.moellendorffii
Alias: CAMK1c-S5_v
External Links:
Annotation:

Classification

Group: CAMK
Family: CAMK1
Subfamily: CAMK1c

Sequence

Name Sequence Type Origin Length Description Download
CAMK1c-S5_v.AA Protein None 250 None Fasta, JSON
CAMK1c-S5_v.NA RNA None 753 None Fasta, JSON
CAMK1c-S5_v.kin_dom Protein Kinase Domain None 117 None Fasta, JSON

Protein domain

Protein domains of CAMK1c-S5_v.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.

Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking.

Show/hide domain list
Domain Protein name Domain Name Range Identity (%) Significance Score Profile Source Profile Range (length) Alignment
Kinase CAMK1c-S5_v.AA AGC 98-214 18 5.1e-38 94.65 In-house 194-395 (395) Show / Hide 
Range on Protein: 98-214
Range on HMM: 194-395/395
Sequence Identity: 18% (40 aa)

VVIGDFGVATDDIKE-----------------------------------------------------MSQYCG--TGKYMAPEVASCKGGHGDGSSQSL
. . ||| ..  ...                                                      .  ||  |  |||||.               
IKLTDFGLCKEGMNDGEKGQQSQSNMKFHWHNKKYQKSNMDTNKCNPNNWQRNNMSQEDDTTRKKRDRTWTFCGPCTPEYMAPEIL--------------

YTKAVDVWA--LGVIAYELLRG-------------------YKLPQQIELLR-----GGVFP--------DGSPVSDEAEDLICGMLAVEPSERLT----
|.||.| |.  ||.. ||.| |                   ... |.|.  |     .  ||        . . .|.|| ||| ..| ..|..||.    
YGKACDWWSFGLGCLMYEMLTGYPPFYGDNPQENRHPFRNPMEMFQKIMNGRYFINWKVKFPFPEDPQFPEDRWFSPEAKDLIKKLLCKDPEKRLGCGGN

------LDGVLEHPWI
       . . .||| 
DFGDKGAEEIKNHPWF
Kinase CAMK1c-S5_v.AA CAMK 98-214 23 8e-29 89.42 In-house 235-425 (425) Show / Hide 
Range on Protein: 98-214
Range on HMM: 235-425/425
Sequence Identity: 23% (45 aa)

VVIGDFGVATDDIK--------------------------EMSQYCGTGKYMA-PEVASCKGGHGDGSS-----QSLYTKAVDVWALGVIAYELLRGY--
. | ||| |.  ..                           |. .|||  ||| ||| . ||..  . .     .  |....|.|..||| | .| ||  
IKIIDFGFANKFDPGENNFMCSDYKGGEMHNQWTTPTEGQKMKTFCGTPEYMAAPEVLNGKGHCNMQ-NATDEEKPYYGPKCDMWSCGVILYIMLCGYPP

----KLPQQIE-------------LLRGGVFP-DGSP---------------VSDE--------AEDLICGMLAVEPSERLTLDGVLEHPWI
    .  ...|               . | .  . ..               .|||        . |||..|| |.|..|.|.. .|.|||.
FYGDCDNEICEDEWIGMNDYELFEKIMKGKYDFPPPYFSPISCNYGPEWWDDISDEFHHFVSQECKDLIRKMLQVDPEKRMTIEQCLNHPWM
Kinase CAMK1c-S5_v.AA Pkinase 98-214 25 4.1e-26 93.4 Pfam 151-293 (293) Show / Hide 
Range on Protein: 98-214
Range on HMM: 151-293/293
Sequence Identity: 25% (39 aa)

VVIGDFGVA----TDDIKEMSQYCGTGKYMAPEVASCKGGHGDGSSQSLYTKAVDVWALGVIAYELLRGYKLPQQI------------ELLRGGVFPDGS
| |.|||.|    .     |. .|||  ||||||           ... |...||.|..|.| ||.| |. . ..             .. .|. ..  .
VKICDFGLAKQFDY-NNS-MTTFCGTPWYMAPEVIR---------GGQYYGPKVDMWSCGCILYEMLCGRPPFPGHCWHDNHDQMQMICRIMGPPLHFDW

PVS---------------------DEAEDLICGMLAVEPSERLTLDGVLEHPWI
| .                     .|. |.|...|.. |..|.| . .|.|||.
PWWCSISYFFFRHWHFHWTFHNWSEECKDFIKWCLCKDPKKRPTAEQILQHPWF
Kinase CAMK1c-S5_v.AA Ciliate-E2 98-214 22 3.3e-23 76.52 In-house 195-365 (365) Show / Hide 
Range on Protein: 98-214
Range on HMM: 195-365/365
Sequence Identity: 22% (39 aa)

VVIGDFGVATDDIKEMSQ----------------------------------YCGTGKYMAPEVASCKGGHGDGSSQSLYTKAVDVWALGVIAYELLRGY
. | ||| ...  ... .                                  .|||  |||||. . |.  .. . |  |....|.|.|||| ||.| |.
IKIIDFGLSKKYDDDNQNRTHKQQCKWYMFKNDTSRTPGYMDQIIQQNMFNTICGTPGYMAPEILNGKKYDNQ-QKQKGYDYKCDIWSLGVILYEMLFGK

KLPQQIELLRGGVFP------------------DGSPVSDEAEDLICG----MLAVEPSERLT-LDGVLEHPWI
     ..    . .                   .   .|.|. |||      || ..|..|.|  . .|.|||.
PPF--QQQIKQCKIDFPCPEWQKDTQCIQCKWKSWKKWSQECKDLIKKFGKRMLQKDPEKRITGWEQILNHPWF
Kinase CAMK1c-S5_v.AA Ciliate-E2-Unclassified 97-214 23 3.9e-21 70.09 In-house 185-352 (352) Show / Hide 
Range on Protein: 97-214
Range on HMM: 185-352/352
Sequence Identity: 23% (41 aa)

EVVIGDFGVAT---DD---------------IKEMSQYCGTGKYM----APEVASCKGGHGDGSSQSLYTKAVDVWALGVIAYELLRGYKLPQQ------
.. | ||| .    ..                ..|.. |||  ||    ||||  .. .... ..     ...|.|.||||.||.| || .| .      
YIKIIDFGISKKYQQNNNCDTNQQQKMQIWKQQMMWTFCGTPNYMPQYTAPEVL-QGQNYDHSKA-----YKCDIWSLGVILYEMLFGY-YPFYDNNCEQ

------------------IELLRGGVFPDGSP-------VSDEAEDLIC----GMLAVEPSERLTLDGVLEHPWI
                   . . . .. . .|       .|.||.|.|      || . |..|.|.. .|.|||.
HQQLITQWINNAYRKQLYQNIKQKNIQFPKFPWQQIPKHWSPEAKDFINDLLQKMLKKNPNKRITFEQILNHPWF
Kinase CAMK1c-S5_v.AA ULK 100-214 26 7.5e-21 69.58 In-house 183-329 (329) Show / Hide 
Range on Protein: 100-214
Range on HMM: 183-329/329
Sequence Identity: 26% (41 aa)

IGDFGVATD-DIK------EMSQY-----CGTGKYMAPEVASCKGGHGDGSSQSLYT-KAVDVWALGVIAYELLRGY------KLPQQ----IELLRGG-
|.||| |   |        .|..      |||  ||||.. . .|       |  |. . .|.| ||.| ||.| |.      . .|.    ..|.. . 
IADFGFAKHVDNDNMEQQMMMTCVNEKRLCGTPLYMAPQILQGQG------EQKPYYDYKCDIWSLGCIFYEMLYGKPPFYAWFNDQYLQIIQKLINNPP

-----------VFP---DGSPVSDEAEDLICGMLAVEPSERLTLDGVLEHPWI
            ||   .. ..|.| .||| .|| .....| . . ...|||.
PWPQQIKKQPLQFPKDGNDPQISPECKDLIRRMLQYDEKDRISWEELFNHPWF
Kinase CAMK1c-S5_v.AA Aur 181-214 50 4.5e-20 49.17 In-house 224-257 (257) Show / Hide 
Range on Protein: 181-214
Range on HMM: 224-257/257
Sequence Identity: 50% (17 aa)

SPVSDEAEDLICGMLAVEPSERLTLDGVLEHPWI
|..|.|| |||.. | ..|..|.||| ...||||
SHISKEAKDLISKILQHDPKQRMTLDQIMNHPWI
Kinase CAMK1c-S5_v.AA ULK 100-214 26 3.9e-19 64.6 In-house 179-324 (324) Show / Hide 
Range on Protein: 100-214
Range on HMM: 179-324/324
Sequence Identity: 26% (40 aa)

IGDFGVATD-DI-----KEMSQYC------GTGKYMAPEVASCKGGHGDGSSQSLYT-KAVDVWALGVIAYELLRGY------KLPQQI---ELLRGG--
|.||| |   |        . ...      ||  ||||.. . .|       |  |. . .|.| ||.| ||.| |.      . .|..   .|.. |  
IADFGFAKHVDNNNMEQQMCQTCVNEKRIKGTPLYMAPQILQGQG------EQKPYYDYKCDIWSLGCIFYEMLYGKYPFFSWFNDQYLYIQKLINNGKE

----------VFP---DGSPVSDEAEDLICGMLAVEPSERLTLDGVLEHPWI
           ||   .. ..|.| .||| .|| .....| . . ...|||.
QQIYIKNQPIQFPKPPKDPKISPECKDLIRRMLQYDEKDRISWEEIFNHPWF
Kinase CAMK1c-S5_v.AA RAD53 183-214 53 1.9e-15 41.94 In-house 274-305 (305) Show / Hide 
Range on Protein: 183-214
Range on HMM: 274-305/305
Sequence Identity: 53% (17 aa)

VSDEAEDLICGMLAVEPSERLTLDGVLEHPWI
.|.|| ||| .|| |.| .|.| |..| |||.
ISEEAKDLIKWMLCVDPEKRYTIDEALNHPWM
S_TKc CAMK1c-S5_v.AA S_TKc 20-214 21 2e-15 49.38 SMART 1-231 (231) Show / Hide 
Range on Protein: 20-214
Range on HMM: 1-231/231
Sequence Identity: 21% (56 aa)

YTRGERLGCGRQGQVFVLKGAR---SYAGKMFRSGREAGRELRLMSKLRPCAGVVSLTGFVR--------ERSGG---------ACYGT-----------
|. .. .| |  |.|.  .  .    .| |. .  . . ||.....|   .  .| | .. .        |  .|           .|.           
YEILRKIGKGAFGKVYKCRHKKTGRIVAIKIIK--EHIRREIQILKK--HHPNIVKLYDVFQDDHLYMVMEYCDGDLGDLFDYIKKRGRHGLRFPFPEHA

-----------------------------MLDASAVHEVVIGDFGVATDDIKEMSQYCGTGKYMAPEVASCKGGHGDGSSQSLYTK-AVDVWALGVIAYE
                             .||     .. |.|||.|.      . .|||  ||||||               |.| ..|.|..|.| ||
RFYMYQICCALEYCHSHGIIHRDLKPENILLDE----HIKICDFGLARQL----TTFCGTPWYMAPEVL-------------GYGKCKCDWWSCGCILYE

LLRGYK--LPQQIELLRGGVFPDGSPVSDEAEDLICGMLAVEPSERLTLDGVLE-------HPWI
.| ||     |. ....  .       |.|| |.|...| ..|..|.|   .|.       |||.
MLCGYPPFP-QMQMMFKKIG-------SPEAKDFIRKCLQKDPEKRPTA-EALQDEWDIKCHPWF
Kinase CAMK1c-S5_v.AA CAMK1 183-214 48 2.6e-15 40.89 In-house 244-276 (276) Show / Hide 
Range on Protein: 183-214
Range on HMM: 244-276/276
Sequence Identity: 48% (16 aa)

VSDE-AEDLICGMLAVEPSERLTLDGVLEHPWI
.||. | |.|..|| |.|..|.| . .|.||||
ISDQEAKDFIKHMLEVDPKKRYTCEQCLNHPWI
Kinase CAMK1c-S5_v.AA CAMK-Unique 96-163 29 2.5e-12 36.81 In-house 210-290 (363) Show / Hide 
Range on Protein: 96-163
Range on HMM: 210-290/363
Sequence Identity: 29% (24 aa)

HEVVIGDFGVATD---DIKE--MSQYCGTGKYMAPEVASCKGGHGDGS-----SQSLYTKAV----DVWALGVIAYELLRGY
. ... ||| ...    ...  |. .|||  |||||.  ||.  .. .      .. |   .    | |.||||.|..| |.
WHIKLCDFGLCCHYNHNKMCHMMQTMCGTPCYMAPEIVFCKN-YQEMTRDEVINMQCYDQQCSPASDIWSLGVIMYYMLCGC
Kinase CAMK1c-S5_v.AA CAMK1 96-163 39 3.1e-12 31.82 In-house 148-213 (276) Show / Hide 
Range on Protein: 96-163
Range on HMM: 148-213/276
Sequence Identity: 39% (29 aa)

HEVV--IGDFGVAT---DDIKEMSQYCGTGKYMAPEVASCKGGHGDGSSQSLYTKAVDVWALGVIAYELLRGY
....  | ||| ..   .|.  |.. |||  |.||||  ||           | ||.|.|  ||| | || ||
SKIKRSIADFGLSKIFDHDENLMKTACGTPGYVAPEVLECKK-------DKPYDKACDMWSIGVITYILLCGY
Kinase CAMK1c-S5_v.AA RAD53 117-164 41 3.5e-11 29.02 In-house 187-239 (305) Show / Hide 
Range on Protein: 117-164
Range on HMM: 187-239/305
Sequence Identity: 41% (22 aa)

CGTGKYMAPEVASCK-----GGHGDGSSQSLYTKAVDVWALGVIAYELLRGYK
|||  | ||||   |     ....  ..|  |||.||.| .|.| | .| ||.
CGTPQYVAPEVITSKGHNCYHENEERQVQVGYTKKVDCWSMGCILYICLCGYP
Kinase CAMK1c-S5_v.AA Aur 116-163 37 3.9e-10 22.41 In-house 161-198 (257) Show / Hide 
Range on Protein: 116-163
Range on HMM: 161-198/257
Sequence Identity: 37% (18 aa)

YCGTGKYMAPEVASCKGGHGDGSSQSLYTKAVDVWALGVIAYELLRGY
.|||  ||.||.          ..|. . . ||.|.|||..|||. |.
FCGTLDYMPPEMV---------EGQM-HDHKVDIWCLGVLCYELCHGC
Kinase CAMK1c-S5_v.AA CAMK-Unique 182-214 37 1.3e-08 24.35 In-house 329-363 (363) Show / Hide 
Range on Protein: 182-214
Range on HMM: 329-363/363
Sequence Identity: 37% (13 aa)

P--VSDEAEDLICGMLAVEPSERLTLDGVLEHPWI
|  .|.|| |.. . . |.|. |...   |||.||
PDYISQEAKDFVKCCMTVDPDHRWSAKELLEHQWI
TyrKc CAMK1c-S5_v.AA TyrKc 20-214 18 2.5e-05 -136.61 SMART 1-280 (280) Show / Hide 
Range on Protein: 20-214
Range on HMM: 1-280/280
Sequence Identity: 18% (54 aa)

YTRGERLGCGRQGQVF--VLKGARSYAGKMFRSGREAG--RELRLMSKL-RPCAGVVSLTGFVRER-----------------SGGACYGTMLDASA---
 | |. ||.|  |.|.  ..|  .  | || ... ..   ||.|.|.||      .| | | ...                  ..|..     .      
ITLGKKLGEGAFGEVYKGTWK--IQVAVKMLKEDAREDFMREARIMCKLGGHHPNIVRLYGVCTQQGRNFMYIEPLMIVMEYMPHGDLKDYLRKHRPKLC

----------------------------------VHEVV---IGDFGVATDDIKEM-------SQYCG----TGK------YMAPEVASCKGGHGDGSSQ
                                  |.|     |.||| .  ||..        . |       ||       ||||.             
MKDLLSFCWQIACGMEYLHSKNCIHRDLAARNCLVGENHTVKISDFGLS-RDIYDDDQQGESKDYYRKKEHKGGKTMLPIRWMAPECI----------NY

SLYTKAVDVWALGVIAYELL-RGYKLPQQ-----------IELLRGGVFPDGSPV---------SDEAEDLICGMLAVEPSERLTLDGVLEHPWI
. .| . |||. ||  .|.. .| . .             ||... |  ..  |          .||  ...    . .|..| |   .  |  .
GKFTTKSDVWSFGVCMWEIFTYGQQPYPGMIQQMMSNQEVIEYVKQGYRMPQPPNDYPMSFVCCPDEMYQIMKQCWHEDPEDRPTFSEI--HECF