Gene CAMK1c-S5_a (S.moellendorffii)
CAMK1c-S5_a
Species: S.moellendorffii
Alias: CAMK1c-S5_a
External Links:
Annotation:
Sequence
| Name | Sequence Type | Origin | Length | Description | Download |
|---|---|---|---|---|---|
| CAMK1c-S5_a.AA | Protein | None | 224 | None | Fasta, JSON |
| CAMK1c-S5_a.NA | RNA | None | 675 | None | Fasta, JSON |
| CAMK1c-S5_a.kin_dom | Protein Kinase Domain | None | 96 | None | Fasta, JSON |
Protein domains of CAMK1c-S5_a.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.
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| Domain | Protein name | Domain Name | Range | Identity (%) | Significance | Score | Profile Source | Profile Range (length) | Alignment |
|---|---|---|---|---|---|---|---|---|---|
| Kinase | CAMK1c-S5_a.AA | AGC | 91-185 | 21 | 7.4e-24 | 57.18 | In-house | 266-395 (395) | Show / Hide |
Range on Protein: 91-185 Range on HMM: 266-395/395 Sequence Identity: 21% (31 aa) CG--TEKYMAPEVMARKGRKGESQSFYTAAIDVWG--LGVIAYELLKG------------------HKSRMEIDFLR------AGAFPT---------GF || | |||||. |. | | |. ||.. ||.| | .. .. . || . CGPCTPEYMAPEIL------------YGKACDWWSFGLGCLMYEMLTGYPPFYGDNPQENRHPFRNPMEMFQKIMNGRYFINWKVKFPFPEDPQFPEDRW GSDQAEDLLRGMLAVEPSKRVT----------LDRVLAHPWI |..| ||....| ..|.|| . . . .||| FSPEAKDLIKKLLCKDPEKRLGCGGNDFGDKGAEEIKNHPWF |
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| Kinase | CAMK1c-S5_a.AA | CAMK | 76-185 | 23 | 2.7e-23 | 71.28 | In-house | 241-425 (425) | Show / Hide |
Range on Protein: 76-185 Range on HMM: 241-425/425 Sequence Identity: 23% (44 aa) GFVRERDGAK------------------------EMSKYCGTEKYMA-PEVMARKGRK------GESQSFYTAAIDVWGLGVIAYELLKG-----HKSRM || .. |. . |. .||| ||| ||| .||.. | . |. ..|.| .||| | .| | ..... GFANKFDPGENNFMCSDYKGGEMHNQWTTPTEGQKMKTFCGTPEYMAAPEVLNGKGHCNMQNATDEEKPYYGPKCDMWSCGVILYIMLCGYPPFYGDCDN EID--------------FLRAGAF--PTGFGSD-----------------------QAEDLLRGMLAVEPSKRVTLDRVLAHPWI || ..| . | . |. .. ||.|.|| |.|.|| |.. .|.|||. EICEDEWIGMNDYELFEKIMKGKYDFPPPYFSPISCNYGPEWWDDISDEFHHFVSQECKDLIRKMLQVDPEKRMTIEQCLNHPWM |
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| Kinase | CAMK1c-S5_a.AA | Pkinase | 87-185 | 23 | 4e-19 | 68.71 | Pfam | 168-293 (293) | Show / Hide |
Range on Protein: 87-185 Range on HMM: 168-293/293 Sequence Identity: 23% (31 aa) MSKYCGTEKYMAPEVMARKGRKGESQSFYTAAIDVWGLGVIAYELLKG-----HK------SRMEIDFLRAGAFPTGFGS-------------------- |. .||| |||||| ... |. ..|.|..|.| ||.| | .. . |.. ... |. . . MTTFCGTPWYMAPEVIR-------GGQYYGPKVDMWSCGCILYEMLCGRPPFPGHCWHDNHDQMQMICRIMGPPLHFDWPWWCSISYFFFRHWHFHWTFH ---DQAEDLLRGMLAVEPSKRVTLDRVLAHPWI . . |.....|.. |.|| | . .| |||. NWSEECKDFIKWCLCKDPKKRPTAEQILQHPWF |
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| Kinase | CAMK1c-S5_a.AA | Aur | 155-185 | 45 | 6.4e-14 | 32.6 | In-house | 227-257 (257) | Show / Hide |
Range on Protein: 155-185 Range on HMM: 227-257/257 Sequence Identity: 45% (14 aa) SDQAEDLLRGMLAVEPSKRVTLDRVLAHPWI |. | || . | ..|..|.||| ...|||| SKEAKDLISKILQHDPKQRMTLDQIMNHPWI |
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| S_TKc | CAMK1c-S5_a.AA | S_TKc | 20-185 | 17 | 1e-12 | 9.71 | SMART | 1-231 (231) | Show / Hide |
Range on Protein: 20-185
Range on HMM: 1-231/231
Sequence Identity: 17% (45 aa)
YMRGKRLGCGGQGQVFMIHNGH--NTYAGKLFRSGSDAEREARLMSKLHACPGVVSFKGFVR-----------ER---DGAKEMSK--------------
| .. .| |. |.|. .. . .| | . ...|| ....| .| .| .... . . | . . |
YEILRKIGKGAFGKVYKCRHKKTGRIVAIKIIK--EHIRREIQILKK--HHPNIVKLYDVFQDDHLYMVMEYCDGDLGDLFDYIKKRGRHGLRFPFPEHA
------------------------------------------------YCGTEKYMAPEVMARKGRKGESQSFYTA-AIDVWGLGVIAYELLKGHK--SR
.||| ||||||. |. ..|.| .|.| ||.| | .
RFYMYQICCALEYCHSHGIIHRDLKPENILLDEHIKICDFGLARQLTTFCGTPWYMAPEVL-----------GYGKCKCDWWSCGCILYEMLCGYPPFP-
MEIDFLRAGAFPTGFGSDQAEDLLRGMLAVEPSKRVTLDRVLA-------HPWI
. .. |..| |..|..| ..|.|| | .|. |||.
QMQMMFKKIG------SPEAKDFIRKCLQKDPEKRPTA-EALQDEWDIKCHPWF
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| Kinase | CAMK1c-S5_a.AA | CAMK1 | 155-185 | 53 | 1.5e-12 | 32.7 | In-house | 245-276 (276) | Show / Hide |
Range on Protein: 155-185 Range on HMM: 245-276/276 Sequence Identity: 53% (17 aa) SDQ-AEDLLRGMLAVEPSKRVTLDRVLAHPWI ||| | |....|| |.|.|| | . .|.|||| SDQEAKDFIKHMLEVDPKKRYTCEQCLNHPWI |
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| Kinase | CAMK1c-S5_a.AA | MSK | 90-135 | 44 | 2.7e-12 | 37.85 | In-house | 165-207 (277) | Show / Hide |
Range on Protein: 90-135 Range on HMM: 165-207/277 Sequence Identity: 44% (21 aa) YCGTEKYMAPEVMARKGRKGESQSF-YTAAIDVWGLGVIAYELLKGH .|.| |||||. .| |..| | .|.|.|.|||| |..| |. PCFTLHYMAPEMLRR----GYAQDGGYDEACDWWSLGVILYTMLTGQ |
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| Kinase | CAMK1c-S5_a.AA | RAD53 | 155-185 | 51 | 3.3e-12 | 32.12 | In-house | 275-305 (305) | Show / Hide |
Range on Protein: 155-185 Range on HMM: 275-305/305 Sequence Identity: 51% (16 aa) SDQAEDLLRGMLAVEPSKRVTLDRVLAHPWI |. | || ..|| |.| || | | .| |||. SEEAKDLIKWMLCVDPEKRYTIDEALNHPWM |
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| Kinase | CAMK1c-S5_a.AA | CAMK1 | 87-132 | 43 | 2.1e-10 | 26.38 | In-house | 170-210 (276) | Show / Hide |
Range on Protein: 87-132 Range on HMM: 170-210/276 Sequence Identity: 43% (20 aa) MSKYCGTEKYMAPEVMARKGRKGESQSFYTAAIDVWGLGVIAYELL |.. ||| |.|||| ..| .| |.|.|. ||| | || MKTACGTPGYVAPEVLECKK-----DKPYDKACDMWSIGVITYILL |
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| Kinase | CAMK1c-S5_a.AA | Ciliate-E2 | 90-134 | 45 | 2.2e-10 | 31.81 | In-house | 247-292 (365) | Show / Hide |
Range on Protein: 90-134 Range on HMM: 247-292/365 Sequence Identity: 45% (21 aa) YCGTEKYMAPEVMARKGRKG-ESQSFYTAAIDVWGLGVIAYELLKG .||| |||||. .|. . . | |. ..|.| |||| ||.| | ICGTPGYMAPEILNGKKYDNQQKQKGYDYKCDIWSLGVILYEMLFG |
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| Kinase | CAMK1c-S5_a.AA | Ciliate-E2-Unclassified | 85-134 | 37 | 2.9e-10 | 31.83 | In-house | 217-266 (352) | Show / Hide |
Range on Protein: 85-134 Range on HMM: 217-266/352 Sequence Identity: 37% (20 aa) KEMSKYCGTEKYM----APEVMARKGRKGESQSFYTAAIDVWGLGVIAYELLKG ..|. ||| || ||||. ... ... ..|.|.||||.||.| | QMMWTFCGTPNYMPQYTAPEVLQGQNYDHSKA----YKCDIWSLGVILYEMLFG |
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| Kinase | CAMK1c-S5_a.AA | RSK | 90-135 | 36 | 6.6e-10 | 32.75 | In-house | 168-209 (278) | Show / Hide |
Range on Protein: 90-135 Range on HMM: 168-209/278 Sequence Identity: 36% (18 aa) YCGTEKYMAPEVMA----RKGRKGESQSFYTAAIDVWGLGVIAYELLKGH .|.| |||||. . ..| ...| |.| |||. ||.| |. FCYTIEYMAPEMLKRANQQGG--------HDKACDWWSLGVLMYEMLTGC |
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| Kinase | CAMK1c-S5_a.AA | RSK | 155-185 | 36 | 8.6e-10 | 32.34 | In-house | 243-278 (278) | Show / Hide |
Range on Protein: 155-185 Range on HMM: 243-278/278 Sequence Identity: 36% (13 aa) SDQAEDLLRGMLAVEPSKRVT-----LDRVLAHPWI |. | ||.|.|| ..|.|| . ......|||. SQEAKDLIRKMLHRDPHKRLGCGPQDAEEIKQHPWF |
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| Kinase | CAMK1c-S5_a.AA | RSK | 155-185 | 38 | 1.2e-09 | 30.84 | In-house | 236-271 (271) | Show / Hide |
Range on Protein: 155-185 Range on HMM: 236-271/271 Sequence Identity: 38% (14 aa) SDQAEDLLRGMLAVEPSKRVTL-----DRVLAHPWI || | ||||.|| . | .|.. ... |||. SDEAKDLLRMMLHRDPHNRLGAGPNGVEQIKQHPWF |
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| Kinase | CAMK1c-S5_a.AA | Ciliate-E2 | 155-185 | 36 | 4.7e-09 | 27.19 | In-house | 330-365 (365) | Show / Hide |
Range on Protein: 155-185 Range on HMM: 330-365/365 Sequence Identity: 36% (13 aa) SDQAEDLLRG----MLAVEPSKRVT-LDRVLAHPWI |... ||.. || ..|.|| | . .| |||. SQECKDLIKKFGKRMLQKDPEKRITGWEQILNHPWF |
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| Kinase | CAMK1c-S5_a.AA | Aur | 90-135 | 39 | 1.1e-08 | 18.5 | In-house | 161-198 (257) | Show / Hide |
Range on Protein: 90-135 Range on HMM: 161-198/257 Sequence Identity: 39% (18 aa) YCGTEKYMAPEVMARKGRKGESQSFYTAAIDVWGLGVIAYELLKGH .||| ||.||. |.|. . .|.| |||..|||. |. FCGTLDYMPPEMV-------EGQM-HDHKVDIWCLGVLCYELCHGC |
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| Kinase | CAMK1c-S5_a.AA | RSK | 91-135 | 42 | 3.7e-08 | 25.47 | In-house | 166-202 (271) | Show / Hide |
Range on Protein: 91-135 Range on HMM: 166-202/271 Sequence Identity: 42% (19 aa) CGTEKYMAPEVMARKGRKGESQSFYTAAIDVWGLGVIAYELLKGH |.| |||||| |.| ...| |.| .||. || | |. CYTANYMAPEVLKRQG--------HDQACDWWSFGVLMYEMLTGC |
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| Kinase | CAMK1c-S5_a.AA | Ciliate-E2-Unclassified | 155-185 | 37 | 4.5e-08 | 24.11 | In-house | 318-352 (352) | Show / Hide |
Range on Protein: 155-185 Range on HMM: 318-352/352 Sequence Identity: 37% (13 aa) SDQAEDLLR----GMLAVEPSKRVTLDRVLAHPWI |..|.|... || . |.|| |.. .| |||. SPEAKDFINDLLQKMLKKNPNKRITFEQILNHPWF |
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| Kinase | CAMK1c-S5_a.AA | RAD53 | 91-136 | 35 | 1.2e-07 | 18.25 | In-house | 187-239 (305) | Show / Hide |
Range on Protein: 91-136 Range on HMM: 187-239/305 Sequence Identity: 35% (19 aa) CGTEKYMAPEVMARKGR---KGESQS----FYTAAIDVWGLGVIAYELLKGHK ||| | |||| . ||. . . . || . |.| .|.| | .| |.. CGTPQYVAPEVITSKGHNCYHENEERQVQVGYTKKVDCWSMGCILYICLCGYP |
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| Kinase | CAMK1c-S5_a.AA | MSK | 155-185 | 35 | 4.8e-07 | 19.84 | In-house | 247-277 (277) | Show / Hide |
Range on Protein: 155-185 Range on HMM: 247-277/277 Sequence Identity: 35% (11 aa) SDQAEDLLRGMLAVEPSKRVTLDRVLAHPWI | .| ||....| . |.|| ... .|| |. SPDAKDLIQWLLTKDPKKRLGMNDLRAHEWK |
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| Kinase | CAMK1c-S5_a.AA | CAMK | 25-74 | 13 | 0.003253 | 5.41 | In-house | 1-103 (425) | Show / Hide |
Range on Protein: 25-74 Range on HMM: 1-103/425 Sequence Identity: 13% (14 aa) RLGCGGQGQVFMIHNGHNT--------------YAGKLFR---------------------------------SGSDAEREARLMSKLHA------CPGV || |. |.|. . ..| .| | . .|| ..|.||.. | . TLGRGSFGKVKLCIHKNTTGKERVHHIYTNGQKVAIKIIDKKKLKDKQNQDYSNCYKIDKSKCKHRYCWRRPKDRKNVRREIEIMKKLQGIGNKLDHPNI VSF ... IKL |
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| Kinase | CAMK1c-S5_a.AA | MSK | 24-49 | 38 | 0.182456 | 0.71 | In-house | 2-27 (277) | Show / Hide |
Range on Protein: 24-49 Range on HMM: 2-27/277 Sequence Identity: 38% (10 aa) KRLGCGGQGQVFMIHNGHNTYAGKLF | || ||.| .| .. . .|||. KVLGTGGYGKFFICRKCVHHDTGKLY |
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| Pkinase | CAMK1c-S5_a.AA | Pkinase | 20-82 | 20 | 3.125784 | 1.9 | Pfam | 1-73 (293) | Show / Hide |
Range on Protein: 20-82 Range on HMM: 1-73/293 Sequence Identity: 20% (15 aa) YMRGKRLGCGGQGQVFMIHNGHNT--YAGKLFRSGSDAE---------REARLMSKLHACPGVVSFKGFVRERD | .|...| |. |.|. |. . .| | .. .. . .|...| .|. .| .| ........| YHIGRKIGSGSFGCVYKCHHKGTGKIVAVKIIKKRHEKSWKDQTHRRLSEIQIMKRLN-HPNIVRLYDWFEDKD |
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