Gene CAMK1c-S4_f (S.moellendorffii)
CAMK1c-S4_f
Species: S.moellendorffii
Alias: CAMK1c-S4_f
External Links:
Annotation:
Sequence
Name | Sequence Type | Origin | Length | Description | Download |
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CAMK1c-S4_f.AA | Protein | None | 178 | None | Fasta, JSON |
CAMK1c-S4_f.NA | RNA | None | 537 | None | Fasta, JSON |
CAMK1c-S4_f.kin_dom | Protein Kinase Domain | None | 86 | None | Fasta, JSON |
Protein domains of CAMK1c-S4_f.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.
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Domain | Protein name | Domain Name | Range | Identity (%) | Significance | Score | Profile Source | Profile Range (length) | Alignment |
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Kinase | CAMK1c-S4_f.AA | Ciliate-E2 | 92-177 | 25 | 3.1e-17 | 55.69 | In-house | 178-293 (365) | Show / Hide |
Range on Protein: 92-177 Range on HMM: 178-293/365 Sequence Identity: 25% (32 aa) SKG-VAHRDLKLENVFTKLQDASIDEPLIGGFGVVT--DDPREMSQ--------------------------------CCGTKKYMAPENIFIERYR--- ||. . |||.|.||.. . | || . ||.... . .||| |||||.. . | SKNNIIHRDIKPENILF---------IKIIDFGLSKKYDDDNQNRTHKQQCKWYMFKNDTSRTPGYMDQIIQQNMFNTICGTPGYMAPEILNGKKYDNQQ -RLSYTKAVDVWGLGVMAYELLKGY . |....|.| |||. ||.| |. KQKGYDYKCDIWSLGVILYEMLFGK |
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Kinase | CAMK1c-S4_f.AA | AGC | 136-177 | 43 | 2.4e-16 | 37.33 | In-house | 266-302 (395) | Show / Hide |
Range on Protein: 136-177 Range on HMM: 266-302/395 Sequence Identity: 43% (20 aa) CG--TKKYMAPENIFIERYRRLSYTKAVDVWG--LGVMAYELLKGY || | ||||| . |.||.| |. ||.. ||.| || CGPCTPEYMAPEIL---------YGKACDWWSFGLGCLMYEMLTGY |
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Kinase | CAMK1c-S4_f.AA | Ciliate-E2-Unclassified | 92-177 | 26 | 3.3e-15 | 49.23 | In-house | 161-267 (352) | Show / Hide |
Range on Protein: 92-177 Range on HMM: 161-267/352 Sequence Identity: 26% (29 aa) SKG-VAHRDLKLENVFTKLQDASI-DEPLIGGFGVVT---DD---------------PREMSQCCGTKKYM----APENIFI-ERYRRLSYTKAVDVWGL .|. . |||.|.||.. ... .. | .|| .. . .|...||| || ||| . . . . . ...|.|.| HKNNIIHRDIKPENIL--FDNNGKNYYIKIIDFGISKKYQQNNNCDTNQQQKMQIWKQQMMWTFCGTPNYMPQYTAPEVLQGQNYDHSKA--YKCDIWSL GVMAYELLKGY || .||.| || GVILYEMLFGY |
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Kinase | CAMK1c-S4_f.AA | Pkinase | 92-177 | 36 | 1.1e-13 | 49.52 | Pfam | 126-209 (293) | Show / Hide |
Range on Protein: 92-177 Range on HMM: 126-209/293 Sequence Identity: 36% (33 aa) SKGVAHRDLKLENVFTKLQDASIDEPL-IGGFGVV----TDDPREMSQCCGTKKYMAPENIFIERYRRLSYTKAVDVWGLGVMAYELLKGY |.|. |||||.||.. . .. ||... |. ||. . . |. ||| ||||| | . |...||.|..|.. ||.| |. SMGIIHRDLKPENILID-NNGHIDACVKICDFGLAKQFDY-NNS-MTTFCGTPWYMAPEVIR----GGQYYGPKVDMWSCGCILYEMLCGR |
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Kinase | CAMK1c-S4_f.AA | CAMK | 92-177 | 22 | 1.1e-13 | 39.71 | In-house | 197-331 (425) | Show / Hide |
Range on Protein: 92-177 Range on HMM: 197-331/425 Sequence Identity: 22% (30 aa) SKGVAHRDLKLENVFTKLQDASID-------------EPLIGGFGVVTDDPR--------------------------EMSQCCGTKKYMA-PENIFIER |....|||||.||. . . | | || . .. |. .||| ||| || . .. SHNIVHRDLKPENILLDDNNDDSDPVEHDEIFDWNNNNIKIIDFGFANKFDPGENNFMCSDYKGGEMHNQWTTPTEGQKMKTFCGTPEYMAAPEVLNGKG YR---------RLSYTKAVDVWGLGVMAYELLKGY . |....|.| .||. | .| || HCNMQNATDEEKPYYGPKCDMWSCGVILYIMLCGY |
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Kinase | CAMK1c-S4_f.AA | Ciliate-E2a | 91-177 | 33 | 1.4e-10 | 27.4 | In-house | 119-213 (275) | Show / Hide |
Range on Protein: 91-177 Range on HMM: 119-213/275 Sequence Identity: 33% (32 aa) QSKGVAHRDLKLENVFTK-LQDASI--DEPLIGGFGVVTDD----PREMSQCCGTKKYMAPENIFIERY-RRLSYTKAVDVWGLGVMAYELLKGY ..... |||||.||.. | . || . | || |. .. | | ||| |.||| . .. . .|.. .|.| .||. | || |. HQRNIMHRDLKPENILFKNCSKNSIQNSDIKIIDFGLATFIDKDEKKYMFQKCGTPGYVAPEVLNNKEVLKHKQYDTKCDMWSCGVIFYILLCGK |
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Kinase | CAMK1c-S4_f.AA | TKL | 93-174 | 18 | 3.4e-10 | 32.94 | In-house | 159-283 (364) | Show / Hide |
Range on Protein: 93-174 Range on HMM: 159-283/364 Sequence Identity: 18% (23 aa) KGVAHRDLKLENVFTKLQDA----------SIDEPLIGGFGVVTDDPRE----------------------MSQCCGTKKYMAPENI-----FIERY--- ....||||| .|.. . ... . |. || .. .. . .|||. .|||| . . | . PPIIHRDLKSKNILVDENWTNVSNYMYNPNADWCCKICDFGLSRFMSQSGNMNDTMTTMMESAEHQNNRKTTMTQCGTPRWMAPEVLRGQMNYTEKVGID ---RRLSYTKAVDVWGLGVMAYELL . ..|....||. |.. .|.| EFCKGFEYSEKCDVYSFGIVLWEIL |
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Kinase | CAMK1c-S4_f.AA | Aur | 136-177 | 40 | 4.6e-10 | 22.21 | In-house | 162-198 (257) | Show / Hide |
Range on Protein: 136-177 Range on HMM: 162-198/257 Sequence Identity: 40% (17 aa) CGTKKYMAPENIFIERYRRLSYTKAVDVWGLGVMAYELLKGY ||| ||.|| . . .. . ||.| |||..|||. |. CGTLDYMPPEMVE-----GQMHDHKVDIWCLGVLCYELCHGC |
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Kinase | CAMK1c-S4_f.AA | MSK | 136-176 | 44 | 2.7e-09 | 27.55 | In-house | 166-206 (277) | Show / Hide |
Range on Protein: 136-176 Range on HMM: 166-206/277 Sequence Identity: 44% (19 aa) CGTKKYMAPENIFIER-YRRLS-YTKAVDVWGLGVMAYELLKG |.| ||||| ..| | . | .|.|.|.||| |..| | CFTLHYMAPE--MLRRGYAQDGGYDEACDWWSLGVILYTMLTG |
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Kinase | CAMK1c-S4_f.AA | RSK | 136-177 | 42 | 4.6e-08 | 25.95 | In-house | 169-209 (278) | Show / Hide |
Range on Protein: 136-177 Range on HMM: 169-209/278 Sequence Identity: 42% (18 aa) CGTKKYMAPENIFIERYRRLSYTKAVDVWGLGVMAYELLKGY |.| ||||| . .. ..||.|.| ||| ||.| |. CYTIEYMAPEMLKRAN-QQGGHDKACDWWSLGVLMYEMLTGC |
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Kinase | CAMK1c-S4_f.AA | MARK | 133-177 | 40 | 4e-06 | 16.26 | In-house | 163-203 (262) | Show / Hide |
Range on Protein: 133-177 Range on HMM: 163-203/262 Sequence Identity: 40% (18 aa) SQCCGTKKYMAPENIFIERYRRLSYTKAVDVWGLGVMAYELLKGY . .|||. ||||| . ..| . ..||.| ||| | .. || NTFCGTPPYMAPEIFLKKPY----DGPKVDIWSLGVVLYFMVCGY |
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Kinase | CAMK1c-S4_f.AA | MARK | 92-105 | 57 | 5.7e-05 | 12.38 | In-house | 122-135 (262) | Show / Hide |
Range on Protein: 92-105 Range on HMM: 122-135/262 Sequence Identity: 57% (8 aa) SKGVAHRDLKLENV ||...|||.|.||. SKNIVHRDIKPENI |
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Kinase | CAMK1c-S4_f.AA | AGC | 92-105 | 56 | 0.000483 | 4.76 | In-house | 171-186 (395) | Show / Hide |
Range on Protein: 92-105 Range on HMM: 171-186/395 Sequence Identity: 56% (9 aa) S-KGVAHRD-LKLENV | .|. ||| ||.||. SHMGIIHRDYLKPENI |
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Kinase | CAMK1c-S4_f.AA | Aur | 92-105 | 57 | 0.000802 | 5.41 | In-house | 119-132 (257) | Show / Hide |
Range on Protein: 92-105 Range on HMM: 119-132/257 Sequence Identity: 57% (8 aa) SKGVAHRDLKLENV ||.. |||.| ||. SKNIIHRDIKPENI |
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Kinase | CAMK1c-S4_f.AA | MSK | 92-105 | 64 | 0.001463 | 7.9 | In-house | 119-132 (277) | Show / Hide |
Range on Protein: 92-105 Range on HMM: 119-132/277 Sequence Identity: 64% (9 aa) SKGVAHRDLKLENV .||. |||||.||. QKGIIHRDLKPENI |
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Kinase | CAMK1c-S4_f.AA | RSK | 92-105 | 57 | 0.002045 | 8.78 | In-house | 122-135 (278) | Show / Hide |
Range on Protein: 92-105 Range on HMM: 122-135/278 Sequence Identity: 57% (8 aa) SKGVAHRDLKLENV ..|. |||||.||. QQGIIHRDLKPENI |