Gene CDK-Un_g (S.moellendorffii)

CDK-Un_g

Species: S.moellendorffii
Alias: CDK-Un_g
External Links:
Annotation:

Classification

Group: CMGC
Family: CDK
Subfamily: CDK-Unclassified

Sequence

Name Sequence Type Origin Length Description Download
CDK-Un_g.AA Protein None 633 None Fasta, JSON
CDK-Un_g.NA RNA None 1902 None Fasta, JSON
CDK-Un_g.kin_dom Protein Kinase Domain None 89 None Fasta, JSON

Protein domain

Protein domains of CDK-Un_g.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.

Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking.

Show/hide domain list
Domain Protein name Domain Name Range Identity (%) Significance Score Profile Source Profile Range (length) Alignment
Kinase CDK-Un_g.AA CMGC 14-78 19 2.4e-11 32.61 In-house 127-219 (513) Show / Hide 
Range on Protein: 14-78
Range on HMM: 127-219/513
Sequence Identity: 19% (18 aa)

NETLYLVFPPAPYTLRSLLHFSP-------GALGDDWQ------------LRFFL------YQIIAGLA--HCHKLE--VFHGNINPSSVLITS
.. |||||   ...|  ...  .       .   .. .             ..|.      |||. ||.  .||.    ..|  . |. .||..
FNHLYLVFEYMDHDLYQYIKNNQFDYQGKRPMPLSE-HENKHPHRRPPHNIKYFMIHIRYMYQILRGLKLKYCHSHWGNIIHRDLKPENILINH
Kinase CDK-Un_g.AA VPS15 45-88 40 6.6e-10 30.59 In-house 100-144 (296) Show / Hide 
Range on Protein: 45-88
Range on HMM: 100-144/296
Sequence Identity: 40% (18 aa)

LRFFLYQIIAGLAHCHKLE-VFHGNINPSSVLITSSMWCWLTGFA
... . |.   |  |||.. |.|| | .. .|.||. || || ||
KKWIAFQTLCALEQCHKQGNVCHGDIKSENILVTSWNWCYLTDFA
Kinase CDK-Un_g.AA CDK 11-66 16 1.2e-08 23.65 In-house 76-131 (284) Show / Hide 
Range on Protein: 11-66
Range on HMM: 76-131/284
Sequence Identity: 16% (11 aa)

FLGN-----------ETLYLVFPPAPYTLRSLLHFSPGALGDDWQLRFFLYQIIAGLAHCHKLEVFH
....            .||.||. ... | ....            . ...|.. ||..||.  . |
CHTKNMDRNNKDKHENKLYMVFEYMDHDLKKYMD-----------IKCYMWQLLRGLHYCHSNWIMH
Kinase CDK-Un_g.AA CDKL 41-79 32 3.9e-05 13.51 In-house 96-135 (286) Show / Hide 
Range on Protein: 41-79
Range on HMM: 96-135/286
Sequence Identity: 32% (13 aa)

DDWQLRFFLYQIIAGLAHCHKLEVFHGNINPSSVLIT-SS
|. ..|  ..||. ....|||  . | .| |   ||| ..
DEHVVRKYMWQILKAINFCHKHNCIHRDIKPENILITPKN
Pkinase CDK-Un_g.AA Pkinase 1-66 25 8.7e-05 18.01 Pfam 59-131 (293) Show / Hide 
Range on Protein: 1-66
Range on HMM: 59-131/293
Sequence Identity: 25% (19 aa)

HPCIAPLTGAFLGNETLYLVFPPAPYTLRSLLHFS-------PGAL-GDDWQLRFFLYQIIAGLAHCHKLEVFH
||.|  | ..|  .  .|.|.. .. .|  ..  .        |.. ...|...|..|||. ||..||.  . |
HPNIVRLYDWFEDKDHIYMVMEYCEGGLY-VMDLFDYISTWRHGCFYFSEWECKFYMYQILRGLEYCHSMGIIH
Kinase CDK-Un_g.AA Ciliate-E2-Unclassified 44-79 26 0.000117 12.11 In-house 139-180 (352) Show / Hide 
Range on Protein: 44-79
Range on HMM: 139-180/352
Sequence Identity: 26% (11 aa)

QLR-----FFLYQIIAGLAHCHKLE-VFHGNINPSSVLITSS
| .     |...||. || ..|.   . | .| |. .|....
QAKYKKAKFYFAQILQGLEYLHHKNNIIHRDIKPENILFDNN
Kinase CDK-Un_g.AA RCK 44-61 50 0.000197 9.65 In-house 104-123 (298) Show / Hide 
Range on Protein: 44-61
Range on HMM: 104-123/298
Sequence Identity: 50% (10 aa)

Q--LRFFLYQIIAGLAHCHK
|  ... .|||..||||.||
QRSIKNIMYQILQGLAHMHK
Kinase CDK-Un_g.AA Ciliate-E2 46-87 23 0.000787 9.01 In-house 163-200 (365) Show / Hide 
Range on Protein: 46-87
Range on HMM: 163-200/365
Sequence Identity: 23% (10 aa)

RFFLYQIIAGLAHCHKLE-VFHGNINPSSVLITSSMWCWLTGF
.|.. .|| .| ..|.   ..| .| |. .|.     . .. |
EFYIACIILALEYLHSKNNIIHRDIKPENILF-----IKIIDF
Kinase CDK-Un_g.AA SCY1 49-79 28 0.009411 5.47 In-house 130-161 (337) Show / Hide 
Range on Protein: 49-79
Range on HMM: 130-161/337
Sequence Identity: 28% (9 aa)

LYQIIAGLAHCH-KLEVFHGNINPSSVLITSS
..||. .|   | . .. |.||.|.|.... .
IFQILDALSFLHNDCHMVHNNICPESIFVNKN
Kinase CDK-Un_g.AA ASK 28-103 30 0.017594 3.85 In-house 78-154 (254) Show / Hide 
Range on Protein: 28-103
Range on HMM: 78-154/254
Sequence Identity: 30% (24 aa)

LRSLLHFSPGALG-DDWQLRFFLYQIIAGLAHCHKLEVFHGNINPSSVLI-TSSMWCWLTGFATTSIRREVFNPTTET
| .||.   | .  ..  ..|.  ||. ||   |  .. |  |    ||. | |  . .  |  |. |    || |||
LSALLRSKWGPMKDNENTMNFYTKQILEGLKYLHENQIVHRDIKGDNVLVNTYSGVVKISDFG-TCKRLAGINPCTET
Beach CDK-Un_g.AA Beach 116-348 30 3.2e-77 267.65 Pfam 1-286 (286) Show / Hide 
Range on Protein: 116-348
Range on HMM: 1-286/286
Sequence Identity: 30% (87 aa)

FKKWFRGELSNFDYLLLLNRLAGRRWGDRCFHTVMPWVI-DFTAKP---DQ--ENDTGWRDLTK------SKWRLAKGDEQLDFTYATAEIPHHVSDECL
 .|| .|..|||.||..|| ..|| . | . . |.|||| |.| ..   |   ..   .|||.|      .. ||.| .|.... .  .. |.| .  . 
TEKWQNGQISNFEYLMWLNIFSGRSFNDLSQYPVFPWVISDYTSETTLDDLNGNDPSTYRDLSKPMGAQMNEERLQKFKERYKE-MDDMG-PFHYGSHYS

SELAVCIYKARRLPLLVLRRVVRSVY--EPNEYPVNMQRLYHWTP--------DECIPEFYSDPEVFRSIHH-----------GMGDLAVPSWA-EDPED
. ..|| |  |  |   |   . .     |...  ...... ...        .|.||||...|| |. ..|            ..|   | |.  .|.|
CPMIVCHYLIRMEPFTTLHIDLQGGKFDHPDRLFHSIEEAWNSCTNKNNMNDFRELIPEFFCCPEFFKNSNHFDFGRQDGKEGKVDDVELPPWCHKSPYD

FIRLHRSALESDRVSRQLHEWIDLTFGYKLSGEAAVLAKNVTLSTTAPSMP-------------------RSSGRR--QLFSKPHPMR
|...|| ||||| || .||.|||| |||| .|..|. |.|| .  | .  .                   .  |    |||.|||| |
FVYKHRKALESDYVSQHLHHWIDLIFGYKQRGKEAIEANNVFHPLTYEDIWDLDNINDDPMEREAIEAQIHNFGQCPQQLFTKPHPQR
Kinase CDK-Un_g.AA SCY1 459-533 18 2.4e-08 25.1 In-house 251-337 (337) Show / Hide 
Range on Protein: 459-533
Range on HMM: 251-337/337
Sequence Identity: 18% (16 aa)

SEAADIFGIGCLVAEIF-LQKPLFDSTSAA-------VWLERKSLPGTLNQLPPHVRIV----VETTLAADIKRRPSAEKLLESPFF
. |.|.|..|||. ...   ||... .| .       .  ... . . ....|. ..      . . |..|...|| ....|....|
TWASDMFSLGCLIWWVYNGKKPQITCNSNPYSTFHRYMEQWNAMSHCWWDHIPKELQEHLGHCYCHLLHQDPTCRPDPQQFLQHCYF
Kinase CDK-Un_g.AA KIS 505-533 44 2e-07 18.07 In-house 445-473 (473) Show / Hide 
Range on Protein: 505-533
Range on HMM: 445-473/473
Sequence Identity: 44% (13 aa)

HVRIVVETTLAADIKRRPSAEKLLESPFF
| |  .   |  || ||..||  | .|||
HLRDLIKSMLHCDIARRIPAEMILCHPFF
Kinase CDK-Un_g.AA Pkinase 459-533 18 5e-06 22.28 Pfam 190-293 (293) Show / Hide 
Range on Protein: 459-533
Range on HMM: 190-293/293
Sequence Identity: 18% (19 aa)

SEAADIFGIGCLVAEIFLQKPLFDST------SAAVWLERKSLPGTLNQLP-----------------------PHVRIVVETTLAADIKRRPSAEKLLE
. ..|....||...| .. .|.|..       .  . ..|.  | .  . |                       .  . ...  |. | |.||.|| .|.
GPKVDMWSCGCILYEMLCGRPPFPGHCWHDNHDQMQMICRIMGPPLHFDWPWWCSISYFFFRHWHFHWTFHNWSEECKDFIKWCLCKDPKKRPTAEQILQ

SPFF
.|.|
HPWF
Kinase CDK-Un_g.AA ASK 460-533 27 4.6e-05 12.59 In-house 176-254 (254) Show / Hide 
Range on Protein: 460-533
Range on HMM: 176-254/254
Sequence Identity: 27% (22 aa)

EAADIFGIGCLVAEIFLQKPLF---DSTSAAVWLER--KSLPGTLNQLPPHVRIVVETTLAADIKRRPSAEKLLESPFF
..|||. .|| . |.   || |   ..  ||..     |  |   ..|  . .  .  . . | ..|.||..||. || 
KPADIWSFGCTMVEMATGKPPFHELGEPQAAMFKVGMYKKHPEIPEELSAECKNFILRCFEPDPCKRASAQDLLQDPFL
Kinase CDK-Un_g.AA CMGC 459-481 29 0.000253 9.09 In-house 313-343 (513) Show / Hide 
Range on Protein: 459-481
Range on HMM: 313-343/513
Sequence Identity: 29% (9 aa)

SEAADIFGIGCLVAEIFLQ--------KPLF
... |. ..||  ||...         ||||
TTPIDMWSVGCIFAEMYTGYQSLIFRGKPLF
Kinase CDK-Un_g.AA Ciliate-E2-Unclassified 458-533 13 0.000429 10.12 In-house 245-352 (352) Show / Hide 
Range on Protein: 458-533
Range on HMM: 245-352/352
Sequence Identity: 13% (15 aa)

ES--EAADIFGIGCLVAEIFLQKPLFDSTSAAV---------------WLERKSL------PGTLN-----QLPPHVRIVVE----TTLAADIKRRPSAE
.|  ...||.. |..  |.  ... |....                   |... .      |   .     ...|..   ..      |  ... |...|
HSKAYKCDIWSLGVILYEMLFGYYPFYDNNCEQHQQLITQWINNAYRKQLYQNIKQKNIQFPKFPWQQIPKHWSPEAKDFINDLLQKMLKKNPNKRITFE

KLLESPFF
..|. |.|
QILNHPWF
Kinase CDK-Un_g.AA CDK 519-533 53 0.000909 7.75 In-house 270-284 (284) Show / Hide 
Range on Protein: 519-533
Range on HMM: 270-284/284
Sequence Identity: 53% (8 aa)

KRRPSAEKLLESPFF
|.| |||  |..|.|
KKRISAEQALQHPYF
Kinase CDK-Un_g.AA CMGC 519-533 40 0.001224 6.8 In-house 499-513 (513) Show / Hide 
Range on Protein: 519-533
Range on HMM: 499-513/513
Sequence Identity: 40% (6 aa)

KRRPSAEKLLESPFF
..|..||  |. |.|
DKRITAEQALQHPYF
Kinase CDK-Un_g.AA RCK 463-481 42 0.001692 6.64 In-house 196-214 (298) Show / Hide 
Range on Protein: 463-481
Range on HMM: 196-214/298
Sequence Identity: 42% (8 aa)

DIFGIGCLVAEIFLQKPLF
||...||  .|.   .|||
DIWAVGCIMYELYMLRPLF
Kinase CDK-Un_g.AA Ciliate-E2 459-533 16 0.00196 7.63 In-house 274-365 (365) Show / Hide 
Range on Protein: 459-533
Range on HMM: 274-365/365
Sequence Identity: 16% (16 aa)

SEAADIFGIGCLVAEIFLQKPLFDSTSAAVWLE-RKSLPGTLNQLPPHVRIVVET----------------------TLAADIKRRPS-AEKLLESPFF
....||. .|..  |    || |        ..   ..|   .|.. .  .. ..                       |  | . |.. .|..|. |.|
DYKCDIWSLGVILYEMLFGKPPF----QQQIKQCKIDFPCPEWQKD-TQ-CI-QCKWKSWKKWSQECKDLIKKFGKRMLQKDPEKRITGWEQILNHPWF
Kinase CDK-Un_g.AA VPS15 463-482 50 0.002232 7.7 In-house 218-239 (296) Show / Hide 
Range on Protein: 463-482
Range on HMM: 218-239/296
Sequence Identity: 50% (11 aa)

DIFGIGCLVAEIFLQK--PLFD
|||  || .||.|.    |.||
DIFSAGCVIAELFCEGDQPPFD
Kinase CDK-Un_g.AA CDKL 520-533 35 0.00287 7.03 In-house 273-286 (286) Show / Hide 
Range on Protein: 520-533
Range on HMM: 273-286/286
Sequence Identity: 35% (5 aa)

RRPSAEKLLESPFF
.|...|.|...|.|
ERMTCEQLMHHPYF
Kinase CDK-Un_g.AA CDK 466-481 47 0.008227 4.64 In-house 207-225 (284) Show / Hide 
Range on Protein: 466-481
Range on HMM: 207-225/284
Sequence Identity: 47% (9 aa)

GIGCLVAEIFL---QKPLF
..||  ||.|.    ||||
SVGCIFAEMFTDVTRKPLF
Kinase CDK-Un_g.AA RCK 521-533 38 0.008428 4.39 In-house 286-298 (298) Show / Hide 
Range on Protein: 521-533
Range on HMM: 286-298/298
Sequence Identity: 38% (5 aa)

RPSAEKLLESPFF
|..|...|. |.|
RITAQQALQHPYF