Gene CDK-Un_f (S.moellendorffii)

CDK-Un_f

Species: S.moellendorffii
Alias: CDK-Un_f
External Links:
Annotation:

Classification

Group: CMGC
Family: CDK
Subfamily: CDK-Unclassified

Sequence

Name Sequence Type Origin Length Description Download
CDK-Un_f.AA Protein None 703 None Fasta, JSON
CDK-Un_f.NA RNA None 2112 None Fasta, JSON
CDK-Un_f.kin_dom Protein Kinase Domain None 45 None Fasta, JSON

Protein domain

Protein domains of CDK-Un_f.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.

Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking.

Show/hide domain list
Domain Protein name Domain Name Range Identity (%) Significance Score Profile Source Profile Range (length) Alignment
Kinase CDK-Un_f.AA CK2 179-218 40 1.4e-07 17.91 In-house 96-135 (288) Show / Hide 
Range on Protein: 179-218
Range on HMM: 96-135/288
Sequence Identity: 40% (16 aa)

ELRQMVLGIRKALKALHGAGLVHRDIRPANVLYDYERRKL
..|  .  . |||   |  | .|||..|.|.. | |.|||
DIRYYMFELLKALDYCHSMGIMHRDVKPHNIMIDHEKRKL
Kinase CDK-Un_f.AA DMPK 190-212 52 1.4e-07 13.92 In-house 112-134 (270) Show / Hide 
Range on Protein: 190-212
Range on HMM: 112-134/270
Sequence Identity: 52% (12 aa)

ALKALHGAGLVHRDIRPANVLYD
|. ..|  | ||||| | |.| |
AIHSIHQMGYVHRDIKPDNMLLD
Kinase CDK-Un_f.AA Dicty3 174-218 23 4.2e-07 19.3 In-house 107-152 (351) Show / Hide 
Range on Protein: 174-218
Range on HMM: 107-152/351
Sequence Identity: 23% (11 aa)

PVSEDELRQMVLGIRKALKALHGAG-LVHRDIRPANVLYDYERRKL
...|.|.. ..  . |.|. .|  . ..|||| . |.. |... ..
RFNEHEISKIICDLVKTLNYIHKNCHIIHRDIKCDNIMLDNDEQHQ
Kinase CDK-Un_f.AA RSK 176-215 45 7.4e-07 20.76 In-house 99-138 (271) Show / Hide 
Range on Protein: 176-215
Range on HMM: 99-138/271
Sequence Identity: 45% (18 aa)

SEDELRQMVLGIRKALKALHGAGLVHRDIRPANVLYDYER
||.| .   . | .|.  ||  | ||||  |.|.||| |.
SEREVKFYMAEIALAMEYLHSQGIVHRDLKPENILYDDES
Kinase CDK-Un_f.AA IKS 175-210 33 2e-06 15.56 In-house 150-185 (360) Show / Hide 
Range on Protein: 175-210
Range on HMM: 150-185/360
Sequence Identity: 33% (12 aa)

VSEDELRQMVLGIRKALKALHGAGLVHRDIRPANVL
..|...  ..  | . .  ||  |..||||.| |.|
IPENQIWSFFRDICHGIHYLHHIGIIHRDIKPPNCL
Kinase CDK-Un_f.AA CDC7 189-217 41 2e-06 13.98 In-house 119-147 (522) Show / Hide 
Range on Protein: 189-217
Range on HMM: 119-147/522
Sequence Identity: 41% (12 aa)

KALKALHGAGLVHRDIRPANVLYDYERRK
.||. .|  | .|||. | | ||  ...|
YALRHVHQFGIIHRDVKPSNFLYNRRTKK
Kinase CDK-Un_f.AA nmo 174-210 40 3e-06 14.61 In-house 98-134 (292) Show / Hide 
Range on Protein: 174-210
Range on HMM: 98-134/292
Sequence Identity: 40% (15 aa)

PVSEDELRQMVLGIRKALKALHGAGLVHRDIRPANVL
..| | ..  .  | . || || |...||||.| |.|
HLSSDHVKVFLYQILRGLKYLHSANILHRDIKPGNLL
Kinase CDK-Un_f.AA GSK 189-212 50 3e-06 14.29 In-house 127-150 (328) Show / Hide 
Range on Protein: 189-212
Range on HMM: 127-150/328
Sequence Identity: 50% (12 aa)

KALKALHGAGLVHRDIRPANVLYD
..|. ||. | .|||| | |.|.|
RGLAYLHSHGICHRDIKPQNILVD
Kinase CDK-Un_f.AA Pkinase 174-212 34 5e-06 22.43 Pfam 102-142 (293) Show / Hide 
Range on Protein: 174-212
Range on HMM: 102-142/293
Sequence Identity: 34% (14 aa)

PV--SEDELRQMVLGIRKALKALHGAGLVHRDIRPANVLYD
..  ||.|.. ... | ..|. .|  | .|||. |.|.|.|
CFYFSEWECKFYMYQILRGLEYCHSMGIIHRDLKPENILID
Kinase CDK-Un_f.AA DCAMKL 175-210 44 5e-06 14.26 In-house 112-147 (279) Show / Hide 
Range on Protein: 175-210
Range on HMM: 112-147/279
Sequence Identity: 44% (16 aa)

VSEDELRQMVLGIRKALKALHGAGLVHRDIRPANVL
..| . . |.. . |||| ||  . ||||| | | |
FTERDAAIMMTCLCKALKYLHEMNIVHRDIKPENLL
Kinase CDK-Un_f.AA MSK 172-212 36 6e-06 16.13 In-house 95-135 (277) Show / Hide 
Range on Protein: 172-212
Range on HMM: 95-135/277
Sequence Identity: 36% (15 aa)

REPVSEDELRQMVLGIRKALKALHGAGLVHRDIRPANVLYD
||  .|.| |. .. .  |.. .|  | .|||. | |.|.|
REHFDESECRMIMRELVMAVDHMHQKGIIHRDLKPENILFD
B3 CDK-Un_f.AA B3 372-467 20 2.8e-13 48.04 Pfam 1-120 (120) Show / Hide 
Range on Protein: 372-467
Range on HMM: 1-120/120
Sequence Identity: 20% (25 aa)

TIKVLNQCCVSGTYVMTLPSNYCKKM----MPH-------------GRAEVIVRDRSGHQWRMRW-----------NWTVQ-PVIGAGWKAFCVHHELVK
  ||. .  ||    |..| ..|..       .             .  .....|..| .|...            ... .  ... ||| ||  . |. 
FFKVMTPSDVSKDCRMYIPKKFCRHHFFFPGLNVSPESRKEMSMDKKPQTITLMDPHGKSWKFKYYPYIWWNRKWYWKSGRMYMLTKGWKEFCKDNGLKA

GDVLVFQKENSSEMITFRVEIFKRR
||..||.     .| .|.| |..| 
GDFCVFKH----NM-KFHVKICRRS