Gene WEE-S1_c (S.moellendorffii)
WEE-S1_c
Species: S.moellendorffii
Alias: WEE-S1_c
External Links:
Annotation:
Sequence
| Name | Sequence Type | Origin | Length | Description | Download |
|---|---|---|---|---|---|
| WEE-S1_c.AA | Protein | None | 125 | None | Fasta, JSON |
| WEE-S1_c.NA | RNA | None | 378 | None | Fasta, JSON |
| WEE-S1_c.kin_dom | Protein Kinase Domain | None | 88 | None | Fasta, JSON |
Protein domains of WEE-S1_c.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.
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| Domain | Protein name | Domain Name | Range | Identity (%) | Significance | Score | Profile Source | Profile Range (length) | Alignment |
|---|---|---|---|---|---|---|---|---|---|
| Kinase | WEE-S1_c.AA | WEE | 27-111 | 27 | 1.8e-23 | 75.61 | In-house | 120-232 (297) | Show / Hide |
Range on Protein: 27-111 Range on HMM: 120-232/297 Sequence Identity: 27% (31 aa) LLNALKHLHSH-GLTHLDVKSDKIYIRNC---------------------VYKIGDLGLASRID----GTISIEDGNLRYLLMELIND--DHSHLDKADM ....|.|.||. |. |.|.| . |.| . ..||||.|...... . ... |. ||. |.... ...|| ||| ICQGLHHIHSNCGMVHMDIKPENIFISKKMNCNQIVNNDQQNNNDWWFNMMCKIGDFGHVTDMNSNNNNPHQEQEGDSRYMAPEILQGYYHYTHLYKADI FSLGATFYKLTRY ||||.|.| |... FSLGITIYELACN |
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| Kinase | WEE-S1_c.AA | WEE | 1-25 | 52 | 3.5e-10 | 30.43 | In-house | 64-88 (297) | Show / Hide |
Range on Protein: 1-25 Range on HMM: 64-88/297 Sequence Identity: 52% (13 aa) HENVVRYFSSWFKNDFLYIQMELCE |...|||.|.| .| .|||||.|. HPHIVRYYSAWEEDDHMYIQMEYCN |
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| Kinase | WEE-S1_c.AA | Ciliate-B2 | 27-102 | 23 | 2e-08 | 15.83 | In-house | 113-197 (197) | Show / Hide |
Range on Protein: 27-102 Range on HMM: 113-197/197 Sequence Identity: 23% (20 aa) LLNALKHLHSHGLTHLDVKSDKIYI-RNCVYKIGDLGLASRID--GTISIEDGNLRYLLMELINDD------HSHLDKADMFSLG |...| ... .|||.| . | . .| |. | | | . |.| .| | ...| ...| .|.| LIDGLIQFRMYNILHLDIKPQNILFMQNGNYVYCDFGISSIKKDNQQIKIKGFTKKYASPEQMECDHNQTFVTNIDFQSDIYSMG |
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| Kinase | WEE-S1_c.AA | Ciliate-E2 | 27-108 | 19 | 5.5e-07 | 20.0 | In-house | 154-289 (365) | Show / Hide |
Range on Protein: 27-108 Range on HMM: 154-289/365 Sequence Identity: 19% (27 aa) LLN---------------ALKHLHSHG-LTHLDVKSDKIYIRNCVYKIGDLGLASRID----------------------GTISIE------------DG .|. ||..||| . | | | . | . || |.||. ..| .|... | ILQGFKTKAEFYIACIILALEYLHSKNNIIHRDIKPENILF----IKIIDFGLSKKYDDDNQNRTHKQQCKWYMFKNDTSRTPGYMDQIIQQNMFNTICG NLRYLLMELINDDHS--------HLDKADMFSLGATFYKL .. |. | .| . |.|..||| ..| . TPGYMAPEILNGKKYDNQQKQKGYDYKCDIWSLGVILYEM |
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| Kinase | WEE-S1_c.AA | CMGC | 26-68 | 27 | 2e-06 | 16.02 | In-house | 188-255 (513) | Show / Hide |
Range on Protein: 26-68 Range on HMM: 188-255/513 Sequence Identity: 27% (19 aa) MLLNALK--HLHSHG--LTHLDVKSDKIYIR-NCVY--------------------KIGDLGLASRID ..|..|| ..|||. | | | | | || . ||.| ||| .. QILRGLKLKYCHSHWGNIIHRDLKPENILINHNCELITRMMWKSEDWNPCQKNGRLKICDFGLARWYH |
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| Kinase | WEE-S1_c.AA | MOK | 27-62 | 38 | 2e-06 | 15.9 | In-house | 109-144 (283) | Show / Hide |
Range on Protein: 27-62 Range on HMM: 109-144/283 Sequence Identity: 38% (14 aa) LLNALKHLHSHGLTHLDVKSDKIYIRNCVYKIGDLG |. .| |.| |. | ||| . | |.. . |..| | LCKSLDHMHRNGIFHRDVKPENILIKQDHLKLADFG |
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| Kinase | WEE-S1_c.AA | CAMK | 1-79 | 12 | 1.1e-05 | 13.51 | In-house | 97-277 (425) | Show / Hide |
Range on Protein: 1-79 Range on HMM: 97-277/425 Sequence Identity: 12% (23 aa) HENVVRYFSSWFK-------------------NDFLYIQM---ELC---EM----------------------------------------LLNALKHLH |.|... . . ....|. | |.| |. .. |....| HPNIIKLYEVYEDPHYFKNTNDYETSKQVFTKDKHMYMVMEIMEYCSGGELFDDLFDYIVEHGCYGEEFDQFDIVERGRFTEREARRYFRQICSAVHYCH SHGLTHLDVKSDKIYIRNC------------------VYKIGDLGLASRIDG-------------------TISIEDGNLR ||. |.| | . | . . || | |.| ..|. |...|. .. SHNIVHRDLKPENILLDDNNDDSDPVEHDEIFDWNNNNIKIIDFGFANKFDPGENNFMCSDYKGGEMHNQWTTPTEGQKMK |
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| Kinase | WEE-S1_c.AA | ULK | 1-64 | 23 | 1.2e-05 | 15.76 | In-house | 77-189 (329) | Show / Hide |
Range on Protein: 1-64 Range on HMM: 77-189/329 Sequence Identity: 23% (27 aa) HENVVRYFS-SWFKND-FLYIQMELCEM----------------------------------LLNALKHLHSHGLTHLDVKSDKIYIRN----------- |.|.|... .. .|. .|| ||.|. .||..|.||.|. | | | . | | | HPNIVKLYDWFETSNHNNIYIIMEYCNGGDLEQYIKKNKKLPEDTEEKKRLSEQEAIQFFKQILNGFKELHKHNIIHRDIKPQNILIHNGQPKTDSKKVH --CVYKIGDLGLA |.||.| |.| PNGVLKIADFGFA |
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| Kinase | WEE-S1_c.AA | Pkinase | 27-125 | 28 | 1.9e-05 | 20.37 | Pfam | 117-228 (293) | Show / Hide |
Range on Protein: 27-125 Range on HMM: 117-228/293 Sequence Identity: 28% (33 aa) LLNALKHLHSHGLTHLDVKSDKIYIR-NCVY----KIGDLGLA----SRIDGTISIEDGNLRYLLMELINDDHSHLDKADMFSLGATFYKLTRYSPPPVS .| .|...||.| | |.|.. | | |.. ||.| ||| .. . | ..|. |.|... . |.||.|.| ..| . || . ILRGLEYCHSMGIIHRDLKPENILIDNNGHIDACVKICDFGLAKQFDY-NNS-MTTFCGTPWYMAPEVIRGGQYYGPKVDMWSCGCILYEMLCGRPPFPG R------RQYQAIC . .|.| || HCWHDNHDQMQMIC |
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| Kinase | WEE-S1_c.AA | STE | 1-25 | 34 | 2.6e-05 | 14.84 | In-house | 89-120 (359) | Show / Hide |
Range on Protein: 1-25 Range on HMM: 89-120/359 Sequence Identity: 34% (11 aa) HENVVRYFSSWFKN-------DFLYIQMELCE |.|.|.|. . ||. | |.| ||... HPNIVKYYGCYFKEGHNHKNDDELWICMEYMD |
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| Kinase | WEE-S1_c.AA | PAKB | 24-49 | 50 | 0.000107 | 13.23 | In-house | 101-126 (252) | Show / Hide |
Range on Protein: 24-49 Range on HMM: 101-126/252 Sequence Identity: 50% (13 aa) CEMLLNALKHLHSHGLTHLDVKSDKI |. | || ||. | | |.||| | CRQVLQALAYLHAQGVIHRDIKSDSI |
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| Kinase | WEE-S1_c.AA | STE20 | 1-25 | 41 | 0.000332 | 11.61 | In-house | 63-91 (288) | Show / Hide |
Range on Protein: 1-25 Range on HMM: 63-91/288 Sequence Identity: 41% (12 aa) HENVVRYFSSWFKN----DFLYIQMELCE |.|.|.|. | .|. | |.| ||.|. HPNIVKYYGSYLKDDTCDDELWIVMEYCG |
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| Kinase | WEE-S1_c.AA | STE20 | 27-47 | 42 | 0.007433 | 6.62 | In-house | 126-146 (288) | Show / Hide |
Range on Protein: 27-47 Range on HMM: 126-146/288 Sequence Identity: 42% (9 aa) LLNALKHLHSHGLTHLDVKSD .| .|..|||.. | |.|.| VLQGLDYLHSNHIIHRDIKAD |
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| Kinase | WEE-S1_c.AA | Pkinase | 1-26 | 38 | 0.023498 | 9.41 | Pfam | 59-84 (293) | Show / Hide |
Range on Protein: 1-26 Range on HMM: 59-84/293 Sequence Identity: 38% (10 aa) HENVVRYFSSWFKNDFLYIQMELCEM |.|.||.. .. .| .|. ||.||. HPNIVRLYDWFEDKDHIYMVMEYCEG |
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| Kinase | WEE-S1_c.AA | Ciliate-E2 | 1-25 | 22 | 0.024982 | 3.78 | In-house | 91-117 (365) | Show / Hide |
Range on Protein: 1-25 Range on HMM: 91-117/365 Sequence Identity: 22% (6 aa) HENVVRYFSSWF--KNDFLYIQMELCE | |..... .. ... .|. ||.|. HPNIIKMYECFQEKDDNNIYLVMEYCQ |
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| Kinase | WEE-S1_c.AA | PAKB | 1-22 | 40 | 0.051617 | 3.4 | In-house | 55-76 (252) | Show / Hide |
Range on Protein: 1-22 Range on HMM: 55-76/252 Sequence Identity: 40% (9 aa) HENVVRYFSSWFKNDFLYIQME |.|.|. .||. .| | . || HPNIVEMYSSYLVGDELWVVME |
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| Kinase | WEE-S1_c.AA | STE | 27-71 | 28 | 0.058037 | 2.87 | In-house | 160-201 (359) | Show / Hide |
Range on Protein: 27-71 Range on HMM: 160-201/359 Sequence Identity: 28% (13 aa) LLNA-LKHLHSHGLTHLDVKSDKIYIRNCVYKIGDLGLASRIDGTI .| . |..||||. | |.|.. | . |. | |...... .. ILKGLLYYLHSHHIIHRDIKPANILL----VKLCDFGVCGQLTDSM |
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