Gene IRAK-0_bm (S.moellendorffii)
IRAK-0_bm
Species: S.moellendorffii
Alias: IRAK-0_bm
External Links:
Annotation:
Sequence
| Name | Sequence Type | Origin | Length | Description | Download |
|---|---|---|---|---|---|
| IRAK-0_bm.AA | Protein | None | 272 | None | Fasta, JSON |
| IRAK-0_bm.NA | RNA | None | 819 | None | Fasta, JSON |
| IRAK-0_bm.kin_dom | Protein Kinase Domain | None | 202 | None | Fasta, JSON |
Protein domains of IRAK-0_bm.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.
Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking.
| Domain | Protein name | Domain Name | Range | Identity (%) | Significance | Score | Profile Source | Profile Range (length) | Alignment |
|---|---|---|---|---|---|---|---|---|---|
| Kinase | IRAK-0_bm.AA | TKL | 45-240 | 20 | 2.6e-38 | 133.58 | In-house | 1-290 (364) | Show / Hide |
Range on Protein: 45-240
Range on HMM: 1-290/364
Sequence Identity: 20% (62 aa)
LGQGASGVVYRGRSSG---------GYNVAVKQLINVEF------------------------KYLVHQAGFAKEIEILSRARHKNVAGLLGFCNSRDD-
.|.|..|.||.|. | |. ||||.. . .. . . .|| ..|| || |. ..|.|.. ..
IGSGGFGEVYKGKWRGWGGKCPSDTGKDVAVKKFKSHNDDEFTKNSQENNDNNNYSDMQLNDPEASWFRFFEEEEIMMMSRLRHPNIVQFMGYCCCPPCG
------------KFLVSEYVPGPN-LTAFLSGQRRKEFDWDKRKIVILGVAKGLAYLHSSG------MEIIHGSLKPSNILIDDDFT-------------
..| ||.|| . | .. |..| .|..|.|..||||.. . ||| ||..|||.|...|
CVCMHPVGPWGQLCIVMEYCPGGSLLHYLH---------WHQRCRWALDIARGMNYLHSMNPKWCTKPPIIHRDLKSKNILVDENWTNVSNYMYNPNADW
-PKLTDHGLYRLLQQTSS-------------------QARDVR-NAVYDPPEASTGTLMSSKG----------------DSYGFGVFLIQMITGQPPWF
.|..| || | ..|... . .. . . .||. |.. .. | | ||. | ..|...|..
CCKICDFGLSRFMSQSGNMNDTMTTMMESAEHQNNRKTTMTQCGTPRWMAPEVLRGQMNYTEKVGIDEFCKGFEYSEKCDVYSFGIVLWEILTRCRPYY
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| Kinase | IRAK-0_bm.AA | IRAK | 39-238 | 31 | 4.7e-31 | 107.35 | In-house | 1-223 (317) | Show / Hide |
Range on Protein: 39-238
Range on HMM: 1-223/317
Sequence Identity: 31% (71 aa)
FDETNILGQGASGVVYRGRSSGGY-NVAVKQLI-NVEFKYLVHQAGFAK---EIEILSRARHKNVAGLLGFCNSRDDKFLVSEYVPGPNLTAFLSGQRRK
|.. | .|.|. |.||||. .. .||| |. ... . | | |.....| ||.|. |.|.| |.. || .| |. | . |..|
FHKDNRIGEGGFGCVYRGQWKNTTGIYAVKKLKEMADMSWNEHWQRFQQSYNELKVCCRCRHPNIVPLYGYCTERQCHCLVYPYMPNGSLEDRLWCQDGQ
EF----DWDKRKIVILGVAKGLAYLHSSG--MEIIHGSLKPSNILIDDDFTPKLTDHGLYR------LLQQTSS---QARDVRN-AVYDPPEAST---GT
| .|. . .| |.|. .||. . |||| |..||| |..||||..| || | . .... . || . | |||. . |
CPPKPLSWHQRCSICWGTACGIQFLHQNHPCTPIIHGDIKSANILLDQHFTPKICDFGLHRFGHPASHKEKQTYTCMMTSHVRGTTWYMPPEFIRDPQGQ
LMSSKGDSYGFGVFLIQMITGQPP
| . | | | ||. | .||...
L-TKKTDVYSFGIVLLEVLTGCRA
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| Kinase | IRAK-0_bm.AA | Pkinase | 39-239 | 29 | 4.2e-29 | 103.98 | Pfam | 1-212 (293) | Show / Hide |
Range on Protein: 39-239 Range on HMM: 1-212/293 Sequence Identity: 29% (63 aa) FDETNILGQGASGVVYRGRSSGGYN-VAVKQLINVEFKYLVHQAGFA-KEIEILSRARHKNVAGLLGFCNSRDDKFLVSEYVPGP----NLTAFLSGQRR . ..|.|..|.||... | ||||.. .. | ..|. . ||.|. | .|.|. |.... ..|. .| ||..| | ...|..|. YHIGRKIGSGSFGCVYKCHHKGTGKIVAVKIIKKRHEKSWKDQTHRRLSEIQIMKRLNHPNIVRLYDWFEDKDHIYMVMEYCEGGLYVMDLFDYISTWRH KEF--DWDKRKIVILGVAKGLAYLHSSGMEIIHGSLKPSNILIDDDFTP----KLTDHGLYRLL-QQTSSQARDVR-NAVYDPPEAST-GTLMSSKGDSY . | ... | ... ...||.|.|| | ||| |||.|||||.. .. |..| || ... .| . .. | .|| |. ..| | . GCFYFSEWECKFYMYQILRGLEYCHS--MGIIHRDLKPENILIDNNGHIDACVKICDFGLAKQFDY-NNS-MTTFCGTPWYMAPEVIRGGQYYGPKVDMW GFGVFLIQMITGQPPW ..|. |..|..|.||. SCGCILYEMLCGRPPF |
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| Kinase | IRAK-0_bm.AA | TKL-Unique | 42-236 | 25 | 8.8e-23 | 77.29 | In-house | 2-225 (290) | Show / Hide |
Range on Protein: 42-236
Range on HMM: 2-225/290
Sequence Identity: 25% (57 aa)
TNILGQGASGVVYRGRSSG-GYNVAVKQLI-NVEFKYLVHQAGFAKEIEILSRAR-HKNVAGLLGFCN----SRDDKFLVSEYVPGPNLTAFLSG-----
| .|.|..|.||.| . || ||.||. | .. . | | .|. .... . |.|. . |.| . . ..|.||.|| .| |.
WNKIGEGGYGQVYKGK--WRGYPVAIKQFHPNEDSSNEMMQE-FENEVNWMKKLHYHPNIVHYMGYCMDHQVYPPNMCIVMEYCPGGSLYDVLHQNNNNN
---QRRKEFDWDKRKIVILGVAKGLAYLHSSGMEIIHGSLKPSNILIDDD-----FTPKLTDHGLYRLLQ--QTSSQARD--------VRNAVYDPPEAS
. ..... .| .. .|.|. |||... |||. ||.||.|.| . . |. | || ... ... . . .. . .||
NNNNNNCKLNMQQRVKMAIDIAQGMYYLHHCEPPIIHRDLKSSNFLVDNNSNIAEWNIKICDFGLSKFNSKINKMTNNEHKGTRNQTRCGSFRWMAPEVL
TG--TLMSSKGDSYGFGVFLIQMITGQ
.. .. | | | | ||. |. ..|..
RMNFCQYSEKSDVYSFGIVLWEIATRK
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| Kinase | IRAK-0_bm.AA | TK | 39-238 | 13 | 1.5e-22 | 71.7 | In-house | 1-395 (486) | Show / Hide |
Range on Protein: 39-238
Range on HMM: 1-395/486
Sequence Identity: 13% (54 aa)
FDETNILGQGASG---VVYRG--------------------------RSSGGYNVAVKQLINV-EFKYLVHQA-------------GFAKEIEILS--RA
. ||.|. | .||.| . | ||||.| . ... .| |.....
ITLGKKLGEGQFGSFGEVYKGEWRGRNPWNGKRFPCHMTVTLKCKNGKEGGKTPVAVKMLKEGDAMSQEEFFDEEMHDRDGGEDFLEEAEEMKMMCHSLG
RHKNVAGLLGFCNSRDDK------------FLVSEYVPGPN----LTAFLSGQRRK--------------------------------------------
.|.|. |.| | . | .| ||.|. . | .| |.|
HHPNIVRLYGVCTQGEPKPCFEVVVHQEPWMIVMEYMPHGDMDGSLRDYLRKCRPKFQHEQDCPDNQHNKYPPSKLHHCMKGDITYSHESNSPCPEEQDY
------------------------------EFDWDKRKIVILGVAKGLAYLHSSGM----EIIHGSLKPSNILIDDDFT-----------PKLTDHG---
.. . . .|.|..|||| . ..|. | |.|.... . |..| |
DDDLIKDHPPPLTTKDLLQMAWQWCLTCKHQLTMHQLL-MCWQIACGMEYLHSKNCEFIQNFVHRDLAARNCLVGENNVCKWHFDGCGPVCKIADFGLSR
-----LYRLLQQ----TSSQARDVRNAVYD------------------------PPEASTGTL---------MSSKGDSYGFGVFLIQMIT-G-QPP
| | ... .... .... . . .||. .. ..| | . |||.. . | | .|.
QGSGVLARDIYSDDDYYRKSSYGTGRPM-WPFEDDPWQDYYRQQSGGKLPIRWMAPECLNDRVFSEAEKYGKFTTKSDVWSFGVLMWEIFTYGQEPY
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| Kinase | IRAK-0_bm.AA | Ciliate-E2 | 39-239 | 18 | 2.8e-22 | 73.27 | In-house | 1-296 (365) | Show / Hide |
Range on Protein: 39-239
Range on HMM: 1-296/365
Sequence Identity: 18% (55 aa)
FDETNILGQGASGVVYRG--RSSGGYN----------------------VAVKQLINVEFKYLVHQAGFAKEIE----------ILSRARHKNVAGLLGF
.. ...|||. |.||.. .. . .|.|.... . ... .||. ||.. |.|. . .
YKFIKKIGQGNFGSVYKCKVWKVQKQFAIKIIDQKQQRQQMQEKVKIKIYAMKIMKKNQIEQIKQEIHIMREINCFYKKINEKNILEQLNHPNIIKMYEC
CN--SRDDKFLVSEYVPGPNLTAFLS---GQRRKE------FDWDKRKIVILGVAK---------------GLAYLHSSGMEIIHGSLKPSNILIDDDFT
... .|| ||. | .| .. .| .| |.. ..| .. ... .| |||| . ||| .||.|||.
FQEKDDNNIYLVMEYCQGGDLFDYIKNNKKKRNHEIEKDKYFTEKEIKYIMKQILQGFKTKAEFYIACIILALEYLHSKNN-IIHRDIKPENILF-----
PKLTDHGLYRLLQ---------QTSSQARDVR------------------------NAVYDPPEASTGTL---------MSSKGDSYGFGVFLIQMITGQ
.|..| || . .. | . . . .. | .|| | . | | . .|| | .|..|.
IKIIDFGLSKKYDDDNQNRTHKQQCKWYMF-KNDTSRTPGYMDQIIQQNMFNTICGTPGYMAPEILNGKKYDNQQKQKGYDYKCDIWSLGVILYEMLFGK
PPW
||.
PPF
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| Kinase | IRAK-0_bm.AA | MLK | 39-238 | 26 | 3.2e-21 | 70.47 | In-house | 1-235 (291) | Show / Hide |
Range on Protein: 39-238 Range on HMM: 1-235/291 Sequence Identity: 26% (63 aa) FDETNILGQGASGVVYRGRSSGGY----NVAVKQ-LINVEFKYLVH---QAGFAKEIEILSRARHKN----VAGLLGFCNSR-DDKFLVSEYVPGPNLTA ... ..| |..|.|..|| . ||||. .. . . | | .|...|.. .|.| . ..| |.. . ..|.||..| | IQFHEWIGSGSFGKVWKGRWRNKDIVAKIVAVKRVRARIF-DKSDTYCEQWDFEMECRHLRILSHPNNHPCIIQFYGVCLQPPCHFCIVMEYCEGGSLYN FLSGQRRKEF------------DWDKRKIVILGVAKGLAYLHSSG-MEIIHGSLKPSNILIDD------DFTPKLTDHGLYRLLQQT-SSQARDVRNAVY .| |.| |.. | | | .|.|..|||| . ||| ||..|||||. . | | .| |. | ..|. . .. . VLHGARSKWMDANHNQKNDRVYDHDHAMNWALQCARGMHYLHSMAPKPIIHRDLKSHNILIDEICHDMHHGTLKICDFGTSRDWHQMCTNMMSNAGTYAW DPPEA---STGTLMSSKGDSYGFGVFLIQMITGQPP ||. . .. | | | . .|| | .|.|.. | MAPEVIQQFRCEKYSEKCDVWSWGVVLWEMLTREVP |
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| Kinase | IRAK-0_bm.AA | STE | 39-183 | 21 | 9.1e-20 | 66.56 | In-house | 1-190 (359) | Show / Hide |
Range on Protein: 39-183
Range on HMM: 1-190/359
Sequence Identity: 21% (42 aa)
FDETNILGQGASGVVYRGRSS-GG-YN--------------VAVKQLINVEF--------------KYLVHQAGFAKEIEILSRAR--HKNVAGLLGFCN
.. ..|.||.|.||... . .. .|.||. . | . . |||.|... . |.|. .| .
WEGIEKIGKGAFGTVYKAMNHKNCNIHKTGEVENNGETGEIMAIKQMNLENCNNKDENQENQELENKNHEEMQQILKEIKIMKKCNHMHPNIVKYYGCYF
-------SRDDKFLVSEYVPGPNLTAFLS---GQRR---------KEFDWDKRKIVILGVAKG-LAYLHSSGMEIIHGSLKPSNILIDDDFTPKLTD
..|. ... ||..| |. .. | . . |. . .... . || |.|||| . ||| .||.|||. ||.|
KEGHNHKNDDELWICMEYMDGGSLDDIIKHKYGCGKPLNHNRQHQHRFPESQIAYICRQILKGLLYYLHSHH--IIHRDIKPANILL-----VKLCD
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| Kinase | IRAK-0_bm.AA | Ciliate-E2-Unclassified | 39-238 | 18 | 3.1e-19 | 63.39 | In-house | 1-269 (352) | Show / Hide |
Range on Protein: 39-238
Range on HMM: 1-269/352
Sequence Identity: 18% (50 aa)
FDETNILGQGASGVVYRGRSSGGYNVAVKQLINVEFKYLVHQAGF----------AKEIE-------------ILSRARHKNVAGLLGFCNSRDDKFLVS
. ..|||. |.||. . . . ..... ... .| ..| . .... ||. | .. .. .... ..|
YKIIKQIGQGGFGKVYKCQHKKQKQYYAMKYMKKIQIYKQKQIMNKDEIMNEMKEMNNKKKYHQRKYNKIMQQILLNHPHPFIVKMFYCFQDKQNIYIVM
EYVPGPNLTAFLSG---------------QRRKEFDWDKRK-----IVILGVAKGLAYLHSSGMEIIHGSLKPSNILIDDD---FTPKLTDHGLYRLLQ-
||..| .| ... ..||.|. . | . . .|| |||... ||| .||.|||.|.. . .|..| |. . .|
EYCEGGDLWQYIKKRKKQKQKGNDLFHNMKQRKIFTEQQAKYKKAKFYFAQILQGLEYLHHKN-NIIHRDIKPENILFDNNGKNYYIKIIDFGISKKYQQ
---------------QTSSQARDVRNAVYD----PPEASTGTLMS----SKGDSYGFGVFLIQMITGQPP
. . . . | .|| | . | | ...|| | .|..|..|
NNNCDTNQQQKMQIWKQQMMWTFCGTPNYMPQYTAPEVLQGQNYDHSKAYKCDIWSLGVILYEMLFGYYP
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| Kinase | IRAK-0_bm.AA | Dicty4 | 39-196 | 28 | 4.5e-19 | 60.4 | In-house | 1-170 (277) | Show / Hide |
Range on Protein: 39-196 Range on HMM: 1-170/277 Sequence Identity: 28% (50 aa) FDETNILGQGASGVVYRGRSSGGYNVAVKQL--INVEF-KYLVHQAGFAKEIEILSRARHKNVAGLLGFCN----SRDDKFLVSEYVPGPNLTAFLSG-- . ....|.|. | ||.|. | |||| | |. | .. |.||..|.. || |. ..| |. . |.||.| || | INIEQRIGKGSFGEVYKGTWR-GKEVAVKKLNNHNQNFDENMLNE--FRKEVHIMCKIRHPNICLFMGACTAPRSHPGKMCIVTEYMPKGNLYSLLHDKP ---QRRKEFDWDKRKI---VILGVAKGLAYLHSSGMEIIHGSLKPSNILIDDDFTPKLTDHGLYRLLQQTSSQ | ... || .| . .|.|...||.. ||| ||..|.|.|.... | .| || .. . ... SEQQQSIKLDWPLIKRAMRMAFDAARGMNWLHCCNPVIIHRDLKSHNLLVDKNWRVKVCDFGLSQYMKKHEDH |
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| Kinase | IRAK-0_bm.AA | TK-Unique | 39-186 | 25 | 2.2e-18 | 60.08 | In-house | 1-179 (294) | Show / Hide |
Range on Protein: 39-186 Range on HMM: 1-179/294 Sequence Identity: 25% (46 aa) FDETNILGQGASGVVYRGRSSGGY-------NVAVKQLINVEFKYLVHQAGFAKEIEILSRAR-HKNVAGLLGFCNSRD-DKFLVSEYVPGPNLTAFLSG . ...|.|| | |.|| .|. .||||.| . .. .. | |||.... |.|. .|| | . | . ... ||.|. || .| LEVGDVIGEGAFGQVWRGEVWGIWKHWDKQKCVAVKMLK--DNATDTDKQDFLKEIQMMKELGDHPNIVQCLGCCTKSDEPWMIIMEYCPCGNLQHYLRT QRRKEFDW---------------DKRK--IV-------ILGVAKGLAYLHSSGMEIIHGSLKPSNILIDDDFTPKLTDHGL |.. .. ..|. | . ..|.|..||.| ..|.|. | .|.|. .|.. |..| |. CRPAMRQHQTYGNLKFDFHHMPDKPRTEPISPKDLYHFAWQIACGMEYLASQRKKIVHRDLCARNVLLTEDKVCKICDFGM |
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| Kinase | IRAK-0_bm.AA | S_TKc | 39-269 | 23 | 9.4e-15 | 39.43 | SMART | 1-231 (231) | Show / Hide |
Range on Protein: 39-269 Range on HMM: 1-231/231 Sequence Identity: 23% (61 aa) FDETNILGQGASGVVYRGRSSG-GYNVAVKQLINVEFKYLVHQAGFAKEIEILSRARHKNVAGLLGFCNSRDDKFLVSEYVPG--PNLTAFLSGQRRKE- .. ...|.|| |.||..| . | ||.|.. . .||.||.. .|.|. |.... . |. ..| ||..| .| .. ..|. YEILRKIGKGAFGKVYKCRHKKTGRIVAIKIIK----------EHIRREIQILKK-HHPNIVKLYDVFQD-DHLYMVMEYCDGDLGDLFDYIKKRGRHGL ---FDWDKRKIVILGVAKGLAYLHSSGMEIIHGSLKPSNILIDDDFTPKLTDHGLYRLLQQTSSQARDVRNAVYDPPEASTGTLMSS-KGDSYGFGVFLI |. . .. ....|.|.|| | ||| |||.|||.|. . |..| || |.| . | .|| . | | . .|. |. RFPFPE-HARFYMYQICCALEYCHSHG--IIHRDLKPENILLDE--HIKICDFGLARQL------TTFCGTPWYMAPEVL---GYGKCKCDWWSCGCILY QMITGQPPWF----LLETVRSAGVMLRDWVWKFFFHFHF----------------TRFF |..|.||. ... .. ..| . | . .| EMLCGYPPFPQMQMMFKKIG--SPEAKDFIRKCLQKDPEKRPTAEALQDEWDIKCHPWF |
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| Kinase | IRAK-0_bm.AA | Pkinase_Tyr | 39-156 | 25 | 2.3e-12 | 42.53 | Pfam | 1-129 (270) | Show / Hide |
Range on Protein: 39-156
Range on HMM: 1-129/270
Sequence Identity: 25% (34 aa)
FDETNILGQGASGVVYRGRSS-----GGYNVAVKQLINVEFKYLVH--QAGFAKEIEILSRA-RHKNVAGLLGFCNSRDDK---FLVSEYVPGPNLTAFL
||.|| |.||.|. ... |||| | . | . .. | .|..|.. .|.|. |.| | .... ..| ||.|. .| .|
ITFGKKLGEGAFGEVYKGTWKGDPDNTKIPVAVKML-K-EGAMHEQNCREDFMREAKIMKQLGHHPNIVRLYGVCTDQGEPNQIYIVMEYMPHGDLLDYL
SGQ--RRKEFDWDKRKIVILGVAKGLAYLHS
. .. .. . .|||..||.|
RKHREDKQPLTMKDLLQMCWQIAKGMEYLES
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| Kinase | IRAK-0_bm.AA | TyrKc | 39-269 | 21 | 5.2e-12 | -28.45 | SMART | 1-280 (280) | Show / Hide |
Range on Protein: 39-269
Range on HMM: 1-280/280
Sequence Identity: 21% (63 aa)
FDETNILGQGASGVVYRGRSSGGYNVAVKQLINVEFKYLVHQAGFAKEIEILSRA--RHKNVAGLLGFCNSR-------DDKFLVSEYVPGPNLTAFLSG
.|| || |.||.|. . ..|||| | . .. | .|..|... .|.|. |.| | . . ..| ||.|. .| .|
ITLGKKLGEGAFGEVYKGTWK--IQVAVKMLKEDA------REDFMREARIMCKLGGHHPNIVRLYGVCTQQGRNFMYIEPLMIVMEYMPHGDLKDYLRK
QRRKEFDWDKRKIVILGVAKGLAYLHSSGMEIIHGSLKPSNILIDDDFTPKLTDHGLYRLL----------QQTSS----QARDVRNAVYDPPEASTGTL
|.| . ... . .|.| .|||| .|| | |.|.....| | .| || | . . .. ..... .||.
HRPK-LCMKDLLSFCWQIACGMEYLHSK--NCIHRDLAARNCLVGENHTVKISDFGLSRDIYDDDQQGESKDYYRKKEHKGGKTMLPIRWMAPECINYGK
MSSKGDSYGFGVFLIQMIT-GQPPWF-----------LLETVRSAGVMLRDWV--------------------WKF------FFHFHFTRFF
..| | . ||| . . | ||.|. ..| |.. . | . |.. | ..|
FTTKSDVWSFGVCMWEIFTYGQQPYPGMIQQMMSNQEVIEYVKQGYRMPQPPNDYPMSFVCCPDEMYQIMKQCWHEDPEDRPTFSEI-HECF
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| Kinase | IRAK-0_bm.AA | STE | 217-240 | 41 | 0.080585 | 2.36 | In-house | 246-269 (359) | Show / Hide |
Range on Protein: 217-240 Range on HMM: 246-269/359 Sequence Identity: 41% (10 aa) SSKGDSYGFGVFLIQMITGQPPWF . | | . .| .| |.||.|||. DTKCDIWSLGCTIIEMATGKPPWH |
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