Gene CG3008 (Fruit Fly)

CG3008

Species: Fruit Fly
Alias: SFO301, CG3008
External Links: Flybase Link ,
Annotation: Drosophila polytene location: 25B1,

Classification

Group: Atypical
Family: RIO
Subfamily: RIO3

Sequence

Name Sequence Type Origin Length Description Download
CG3008.AA Protein Various 603 None Fasta, JSON
CG3008.kin_dom Protein Kinase Domain None 8 None Fasta, JSON

Protein domain

Protein domains of CG3008.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.

Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking.

Show/hide domain list
Domain Protein name Domain Name Range Identity (%) Significance Score Profile Source Profile Range (length) Alignment
Kinase CG3008.AA RIO1 289-499 39 9.3e-113 352.11 Pfam 1-200 (200) Show / Hide 
Range on Protein: 289-499
Range on HMM: 1-200/200
Sequence Identity: 39% (87 aa)

VILHANSDANYTGSNEHGHQSGVLVPPQLLPRECAIKIFKTTLNEFKQRDRYIKDDYRFKDRFSKQNHRVIINMWAEKEMHNLMRMQAIGLNVPDVVVLK
.. || |    . ....               |||.||..|....||...||...|.||..|....|.|....||||||..||.||...|...| .. ..
NVYHAYS----MEDGKD---------------ECAVKIYRTGTTCFKKMKRYRDYDFRFRHRYHHHNWRYMVRMWAEKEFRNLKRMYEAGVPCPKPIDWN

KHVLVMRFIG-DNHNAAPKLKDAR----LSDAELSCAYEEIVA-AMHKLYNEAKLVHADMSEYNILWFEG-KCWFIDVAQSVEPKHPSALEFLMRDCGNI
.|||||.||| ... .||.|||.     ||. |... |.||.   |...|.|..|||.|.||||||.... |.|.||..|.||. || |||||.|||.||
RHVLVMEFIGDKDGWPAPRLKDVEMELELSEEEAEEIYDEIIREYMRRMYQECGLVHGDLSEYNILVHDDGKPWIIDWPQAVEHDHPHALEFLERDCRNI

VNFFERRGLPN-IYTKEQL
.|||.|.| .. ... ...
INFFRRKGVDERVMDFREI
RIO CG3008.AA RIO 247-505 41 2.6e-104 353.77 SMART 1-253 (253) Show / Hide 
Range on Protein: 247-505
Range on HMM: 1-253/253
Sequence Identity: 41% (112 aa)

KHEKVATAEMGLDAGTRLLLYKLINNQILEQIN--GIISTGKEAVILHANSDANYTGSNEHGHQSGVLVPPQLLPRECAIKIFKTTLNEFKQRDRYIKDD
  |. ||.|  .|  ||..|||..|. ..| ||  |.|||||||.. || .                    .  ..|||.||..|...||| ..|||..|
DKEDYATYEEVFDPRTRMTLYKMVNRGYIEEINNHGCISTGKEANVYHAMGG-----------------DFDKNGNECAVKIYRTSTTEFKRMWRYIQGD

YRFKDRFSKQNHRVIINMWAEKEMHNLMRMQAIGLNVPDVVVLKKHVLVMRFIGDNHNAAPKLKDARLSDAELS---CAYEEIVAAMHKLYNEAKLVHAD
 |||..... | |... .|||||..||.||.. |...| .. ...||||| ||||.  .||.|||. . ..|      .|. |.  |.|.|.|..|||||
FRFKHGYHHINWRKMVRLWAEKEFRNLQRMYEAGVPCPKPIAWRRHVLVMEFIGDDGWPAPRLKDVEWEEWEMDFKWEYYWQIMEYMRKMYHECHLVHAD

MSEYNILWF------EGKCWFIDVAQSVEPKHPSALEFLMRDCGNIVNFFERRGLPNIYTKEQLFEFITG
.||||.|.       ..| |.||..||||. || .|||| ||. || |||.|.| ..  . ...||.|||
LSEYNMLYHDLEDENDCKVWIIDWSQSVECDHPMWLEFLERDIWNIINFFRRKGVDCDDIYREIFERITG
Kinase CG3008.AA RIO3 252-514 53 5.6e-100 338.0 In-house 2-254 (254) Show / Hide 
Range on Protein: 252-514
Range on HMM: 2-254/254
Sequence Identity: 53% (140 aa)

ATAEMGLDAGTRLLLYKLINNQILEQINGIISTGKEAVILHANSDANYTGSNEHGHQSGVLVPPQLLPRECAIKIFKTTLNEFKQRDRYIKDDYRFKDRF
.|||  .|  ||||.||..|  .|| | | |.||||.|..||     | || |  ..       ...| .||||.|||||||||.||.|||||.||||||
STAEKAVDPKTRLLMYKMVNSGMLETITGCIATGKESVVFHA-----YGGSMEDEKEDS-----KVIPTICAIKVFKTTLNEFKNRDKYIKDDFRFKDRF

SKQNHRVIINMWAEKEMHNLMRMQAIGLNVPDVVVLKKHVLVMRFIGDNHNAAPKLKDARLSDAELSCAYEEIVAAMHKLYNEAKLVHADMSEYNILWFE
|| | | |  |||||||||| |||  |. .| ||.||||.||| ||| .   |||||. .|   |.  || . .  | .|| |  |||||.||||.||  
SKLNPRKIHRMWAEKEMHNLARMQRAGIPCPTVVLLKKHILVMSFIGHDQVPAPKLKEVKLNSEEMKEAYYQTLHLMRQLYHECTLVHADLSEYNMLWHA

GKCWFIDVAQSVEPKHPSALEFLMRDCGNIVNFFERRGLPNIYTKEQLFEFITGLNSEVHTAA
|| |.|||.||||| ||  ||||.||| |.  ||.. |. .  .. .||. ..|||      |
GKVWLIDVSQSVEPTHPHGLEFLFRDCRNVSQFFQKGGVKEALSERELFNAVSGLNITADNEA
Kinase CG3008.AA RIO 254-513 30 4.4e-90 305.58 In-house 1-276 (276) Show / Hide 
Range on Protein: 254-513
Range on HMM: 1-276/276
Sequence Identity: 30% (89 aa)

AEMGLDAGTRLLLYKLINNQILEQINGIISTGKEAVILHANSDANYTGSNEHGH----QSGVLVPPQLLPRECAIKIFKTTLNEFKQRDRYIKDDYRFKD
.|  .|  ||...||..| ...| ... |..|||..| |.        ||| |      | |      .| ||||||..|....|| |..|......||.
YEQTNDPYTRMIMYKMVNRGMVESVGNCIGVGKESDIYHC--------SNENGEDEKEDSKV------IPTECAIKIHRTGRTSFKDRKKYRDGEFYFKH

RFSKQNHRVIINMWAEKEMHNLMRMQAIGLNVPDVVVLKKHVLVMRFIGDNHNAAPKLKDARLS-DAELSCAYEEIVAAMHKLYNEAKLVHADMSEYNIL
|..| | | .. .||||||.|. |..  |  .| .. .|.||||| ||. .  .|||.......   . . .| . .. | .||... |||.| .|.|..
RHCKHNWRYMHRLWAEKEMRNMKRLYQSGFPCPEPIDYKRHVLVMEFINHDQMPAPKYPMCQIHEHENMKHVYHQCMCYMRRLYQHCRLVHCDFNEFNMM

WFEGKC-------WFIDVAQSVEPKHPSALEFLMRDCGNIVNFFERRGLPNIYTKEQLFEFI------------------TGLNSEVHTA
| .||        . ||. |.||..|| ||... ||| ..  ||..|.   . .   .|.|                   .... ..   
WHDGKHDENDCGFYMIDFPQMVEHDHPHALWYFRRDCKCVNMFFMKRFVYEPFPEREMFDFVGFGDGYKYAYPDFKRDVKRTDTLDHENM
Kinase CG3008.AA RIO1 321-499 40 9.3e-56 191.01 In-house 47-225 (225) Show / Hide 
Range on Protein: 321-499
Range on HMM: 47-225/225
Sequence Identity: 40% (72 aa)

ECAIKIFKTTLNEFKQRDRYIKDDYRFKDRFSKQNHRVIINMWAEKEMHNLMRMQAIGLNVPDVVVLKKHVLVMRFIGDNHNAAPKLKDARLSDAELS-C
| ||||.||    || |..|.   .||    .| | |  | .|||||| || |.       |  ...| .||.| ||| .  |||.|||. ... .    
EYAIKIYKTSILVFKDREKYVDGEFRFRHGHCKHNPRKMIKIWAEKEMRNLKRIYQSEIPCPEPIMVKSNVLMMEFIGKDGMAAPRLKDYQYKERDQYFH

AYEEIVAAMHKLYNEAKLVHADMSEYNILWFEGKCWFIDVAQSVEPKHPSALEFLMRDCGNIVNFFERRGLPNIYTKEQL
 |  ... |  .|  . |||||.||||.| ...|   ||| ||||. || .|||| .|| |.  .|....   |..   .
YYHQMIQYMRRMYQDCRLVHADLSEYNMLYHNDKLYMIDVSQSVEHDHPHSLEFLRMDCKNVNMYFMKHNV-IIFPVRDI
Kinase CG3008.AA RIO1 258-293 47 3.7e-08 24.45 In-house 3-38 (225) Show / Hide 
Range on Protein: 258-293
Range on HMM: 3-38/225
Sequence Identity: 47% (17 aa)

LDAGTRLLLYKLINNQILEQINGIISTGKEAVILHA
.|  ||..|.|..   |.  ||| ||||||.   ||
IDPRTRMILFKMLTRGIITEINGCISTGKETNVYHA