Gene TAF1 (Bakers Yeast)

TAF1

Species: Bakers Yeast
Alias: TAF1
External Links: Saccharomyces Genome Database Link ,
Annotation:

Classification

Group: Atypical
Family: TAF1

Sequence

Name Sequence Type Origin Length Description Download
TAF1.AA Protein Refseq_NP 1066 TAFII complex component required for activated transcription; Taf1p [Saccharomyces cerevisiae] Fasta, JSON

Protein domain

Protein domains of TAF1.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.

Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking.

Show/hide domain list
Domain Protein name Domain Name Range Identity (%) Significance Score Profile Source Profile Range (length) Alignment
DUF3591 TAF1.AA DUF3591 439-883 52 5.2e-303 1017.7 Pfam 1-494 (494) Show / Hide 
Range on Protein: 439-883
Range on HMM: 1-494/494
Sequence Identity: 52% (258 aa)

FNL--SNDDKYQILKKTHQTKVRSTISNLNIQHSQPAINLQSPFYKVAVPRYQLRHFHRENFGSHIRPGTKIV--FSKLKARKRKRDK------GKDVKE
||.  |||..|..||. ||.|||.||.||||.||.||..||.|.||| ... ..|.||| .|...|||||.|.  ||||| ||||.||      |||..|
FNIIFSNDEYYDMLKENHQNKVRQTIGNLNIEHSMPALRLQWPYYKVKLNKREARSFHRPHFQFYIRPGTQIWVRFSKLKHRKRKHDKREKERMGKDISE

SFS--TSQDLTIGDTAPVYLMEYSEQTPVALSKFGMANKLINYYRKANEQDTLRPKLP-VGETHVLGVQDKSPFWNFGFVEPGHIVPTLYNNMIRAPVFK
.|.  |..|||.||..||.||||.|..| ..|.|||..|.||||||....|| ||||. .||||||..||||||||||.|.||.|||||||||.|||.||
VFKMRTTKDLTLGDNSPVILMEYCEEYPPVMSNFGMGSKIINYYRKKHMEDTHRPKLDDIGETHVLHPQDKSPFWNFGHVHPGEIVPTLYNNMYRAPIFK

HDISGTDFLLTKSSG-FGISNRFYLRNINHLFTVGQTFPVEEIPGPNSRKVTSMKATRLKMIIYRILN--HNHSKAISIDPIAKHF-PDQDYGQNRQKVK
|....||||. .|.. .|.....|||||.|.|.||||||| |.|||.|||||.|. .|||||.||...  ......|||..|.||| |||...||||..|
HKPEPTDFLCIRSTTPGGHGQKYYLRNIDHMFCVGQTFPVMEVPGPHSRKVTNMSKNRLKMIVYRLFWGQKSPRHRISIHDITKHFFPDQNEMQNRQRLK

EFMKYQRDG-PE-KGLWRLKDDEKLLDN-EAVKSLITPEQISQVESMSQGLQFQEDNEAYNFDSK---------------------LKSLEENLLPWNIT
||||||||| .. .|.|.||..|.|.|. |.....||||... .|||  |.|.. ... ||...                      . .||... |||.|
EFMKYQRDGGMDNQGWWKLKEGETLPDEFEEIRKMITPEDCCLYESMQVGQQHL-EDAGYNNTDEFKRDYQQIQEDDDEETKKVQMKIDLEQMMAPWNTT

KNFINSTQMRAMIQIHGVGDPTGCGEGFSFLKT-SMKGGFVKSGSPSSNNNSSNKKGTNT-----HSYNVAQQQKAY---DEEIAKTWYTHTKSL
.||||.||..||.|.||.||||||||||||..| ||||||.|.|..  .. ... .||..     |||||||||..|   .|||...||....||
RNFINATQGKAMLQLHGEGDPTGCGEGFSFIRTKSMKGGFLKQGEGPQDKPKKAVAGTRAKERGGHSYNVAQQQRLYGVPEEEIRRIWYWQKRSL