Gene AdckC (Slime mold)

AdckC

Species: Slime mold
Alias: DdisK250, AdckC, DDB0220789, abkC
External Links: DictyBase Link ,
Annotation:

Classification

Group: Atypical
Family: ABC1
Subfamily: ABC1-C

Sequence

Name Sequence Type Origin Length Description Download
AdckC.AA Protein None 689 None Fasta, JSON
AdckC.kin_dom Protein Kinase Domain None 8 None Fasta, JSON

Protein domain

Protein domains of AdckC.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.

Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking.

Show/hide domain list
Domain Protein name Domain Name Range Identity (%) Significance Score Profile Source Profile Range (length) Alignment
Kinase AdckC.AA ABC1-C 283-425 41 3e-36 110.57 In-house 2-146 (307) Show / Hide 
Range on Protein: 283-425
Range on HMM: 2-146/307
Sequence Identity: 41% (60 aa)

VVKVLHPNVKSNIKRDFFIIYSLIWAFSHIPEMKWLSLPESILEFGKSMMKQADLELEASHLNRFNSNFKYNSEVIFPKPLYPLVSKEVLVESFEPGSPI
 |||||| .   .  |  ..         .| .||||||| . || | |..| ||  ||  |  |  ||.    | || || | | .||||| .|   |.
AVKVLHPGLLAQVHMDLLLMKIGSRVLGVLPGIKWLSLPEIVEEFEKLMVQQIDLRYEAQNLEHFQVNFRNVKAVKFPTPLRPFVTREVLVETYEESVPV

MDFIKKN--DHHNPTLAKIGLSAYMQMMLVDNFVHADLHPGNVLV
  . .          .|..|.   ..|. |||||||||||||.||
SSYQQAGIPVDLKRKIARLGINMLLKMIFVDNFVHADLHPGNILV
ABC1 AdckC.AA ABC1 244-363 29 1.3e-27 95.15 Pfam 1-126 (126) Show / Hide 
Range on Protein: 244-363
Range on HMM: 1-126/126
Sequence Identity: 29% (38 aa)

NSFNGKSIKDLFLWFDEEPMASGSVAQVHKALTMD-GKVAVVKVLHPNVKSNIKRDFFIIYSLIWAFSHIPEMK---WLSLPESILEFGKSMMKQADLEL
.... . ....|  |||||.|..| ||||.| . | |.  .|||.||.||....||. ... .  ..  ..  .   .. | . . || |.. .  |...
EELG-CPWEEIFQEFDEEPIAAASIAQVHRARLKDDGEEVAVKVQHPGVKKRMMRDIYNMRWMAKWVKRFFPGYRRQRFDLMWIVDEFRKNLPWELDYRR

EASHLNRFNSNFKYN---SEVIFPKPL
|| .  ||  ||. .   ..|  ||  
EAKNMERFRENFRHWHRQPWVYVPKVY
Kinase AdckC.AA ABC1 248-363 29 1.9e-19 70.91 In-house 4-123 (123) Show / Hide 
Range on Protein: 248-363
Range on HMM: 4-123/123
Sequence Identity: 29% (36 aa)

GKSIKDLFLWFDEEPMASGSVAQVHKALTMDGKVAVVKVLHPNVKSNIKRDFFIIYSLIWAFSHIPE---MKWLSLPESILEFGKSMMKQADLELEASHL
|  ..| |  |||.|.|. | ||||.|   ||   .|||.||.|. .|. | . .  .  . .  ..   .||..|.. . || |.. .. |.. ||. .
G-NWEDVFSEFDEKPFAAASIAQVHRAKLKDGQTVAVKVQHPGVREQIHYDINNMEMVVKMCDWFFPGPDFKWFFLMWFVDEFQKELPWECDFNNEARNA

NRFNSNFK--YNSEVIFPKPL
 ..  .||     .. .|...
EKCRQLFKKFHWPFFYVPRIH
Kinase AdckC.AA ABC1-B 248-302 40 9.9e-11 36.0 In-house 4-57 (125) Show / Hide 
Range on Protein: 248-302
Range on HMM: 4-57/125
Sequence Identity: 40% (22 aa)

GKSIKDLFLWFDEEPMASGSVAQVHKALTMDGKVAVVKVLHPNVKSNIKRDFFII
|  | | |  ||..| |. | ||||.|   ||    ||| ||... ... | . .
G-NIEDVFSEFDQKPIAAASLAQVHRAKLHDGETVAVKVQHPWLRKQFHYDMMMM
Kinase AdckC.AA ABC1-A 258-286 44 2e-06 18.88 In-house 1-29 (216) Show / Hide 
Range on Protein: 258-286
Range on HMM: 1-29/216
Sequence Identity: 44% (13 aa)

FDEEPMASGSVAQVHKALTMDGKVAVVKV
| | |.|  |  |||.|.  ||.  .||.
FEEMPFACASIGQVHQAVLKDGREVAVKI
Kinase AdckC.AA ABC1-C 498-624 38 4.2e-25 75.08 In-house 181-307 (307) Show / Hide 
Range on Protein: 498-624
Range on HMM: 181-307/307
Sequence Identity: 38% (50 aa)

KLIFLDVGLVTQLGQQDKDHFIELFTEIVNGNGKEGAELLIRYAREAKCTEEEMYQFKERMGTLFNQVQNS--KLSEVHVGQFMSEILGLVREYHVKIES
.|. || |.|  |   |   |   |  .| | |.  |||..  || . | . |   ||  |  |  |       |  .||   .| .  |.    ||.||
RLVLLDAGIVAELQAPDLRNFRAVFMAVVMGQGQRVAELILHHARASECRDVEG--FKTEMAMLVTQARKNTITLEKLHVSSLLSSVFKLLMTHKVKLES

NFATLVMGTIVLEGLGKQLDPSLGLLKAA
||| .|   .||||||. ||| | .| ||
NFASIVFAIMVLEGLGRSLDPKLDILEAA