Rio2

Species: Slime mold
Alias: Rio2, DdisK283, DDB0216429
External Links: DictyBase Link ,
Annotation:

Classification

Group: Atypical
Family: RIO
Subfamily: RIO2

Sequence

Name Sequence Type Origin Length Description Download
Rio2.AA Protein None 522 None Fasta, JSON
Rio2.kin_dom Protein Kinase Domain None 8 None Fasta, JSON

Protein domain

Protein domains of Rio2.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.

Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking.

Domain Protein name Domain Name Range Identity (%) Significance Score Profile Source Profile Range (length) Alignment
Kinase Rio2.AA RIO2 71-306 51 1.3e-144 486.67 In-house 1-260 (260) Show / Hide
Range on Protein: 71-306
Range on HMM: 1-260/260
Sequence Identity: 51% (135 aa)

YKLTYLGYDFLALKTLVSRGVCSYVGNQIGVGKESDIYIVANDDNQEMVLKLHRLGRVSFKTIKNNRDYLKHRKSASWLYLSRLAALKEFAYMKALYENG
|.||  |||.|||||| || |   ||||.|||||||||...| . . ...|.||||| ||..|||||||.||| ..||.|||||.| ||...|..||...
YRLTNAGYDYLALKTLSSRQVVYSVGNQMGVGKESDIYKCSNENGNQFIMKFHRLGRTSFHNIKNNRDYHKHRHQYSWMYLSRLSAMKEYQFMDMLYKRN

FPVPTPIDYNRHCIVMSRARGYPLTQIVQLRHPSKVYSDLMNLIVKLASYGLIHGDFNEFNILINDEEE------ITLIDFPQMVSTSHLNAEMYFDRDV
|||| ||||||| .||.   |||. || .   | .||...| .||.||  ||||.||||||..| |. .      ...|||||||||.| ||. ||||||
FPVPKPIDYNRHIVVMELINGYPMCQIHHHDNPPYVYDQCMCFIVRLANHGLIHCDFNEFNLMIDDNDHDENDCGFIMIDFPQMVSTQHQNAQWYFDRDV

TCIRVFFEKRFNFIGERWP------------------KFKDCQNIHSLDVEISASGFTRD
 ||..||.||||.  .  |                   |.| |    ||.|..||||.  
DCIHRFFMKRFNYEPKPFPSMLDTEGFGDGYKYAYPDFFRDIQRTDTLDEEVQASGFNKK

Kinase Rio2.AA RIO 71-299 35 4.1e-109 368.8 In-house 1-276 (276) Show / Hide
Range on Protein: 71-299
Range on HMM: 1-276/276
Sequence Identity: 35% (99 aa)

YKLTYLGYDFLALKTLVSRGVCSYVGNQIGVGKESDIYIVANDDNQ-----------EMVLKLHRLGRVSFKTIKNNRD---YLKHRKS-ASWLYLSRLA
|..|  .|. ......|.||.   |||.||||||||||...| . .           | ..|.||.|| |||..|..||   |.||| . ..|.|..||.
YEQTNDPYTRMIMYKMVNRGMVESVGNCIGVGKESDIYHCSNENGEDEKEDSKVIPTECAIKIHRTGRTSFKDRKKYRDGEFYFKHRHCKHNWRYMHRLW

ALKEFAYMKALYENGFPVPTPIDYNRHCIVMSRARG-------YPLTQIVQLRHPSKVYSDLMNLIVKLASYG-LIHGDFNEFNILINDEEE------IT
| ||...||.||..|||.|.||||.|| .||.   .       ||. ||  .  ...||...| ....|.  . |.|.||||||... |. .      ..
AEKEMRNMKRLYQSGFPCPEPIDYKRHVLVMEFINHDQMPAPKYPMCQIHEHENMKHVYHQCMCYMRRLYQHCRLVHCDFNEFNMMWHDGKHDENDCGFY

LIDFPQMVSTSHLNAEMYFDRDVTCIRVFFEKRFNFIGERWPKFKDCQ------------------NIHSLDVEIS
.|||||||...| .|. ||.||. |...||.|||. . .  . ..|                       .||.| .
MIDFPQMVEHDHPHALWYFRRDCKCVNMFFMKRFVYEPFPEREMFDFVGFGDGYKYAYPDFKRDVKRTDTLDHENM

Kinase Rio2.AA RIO1 106-285 28 7e-67 209.03 Pfam 1-200 (200) Show / Hide
Range on Protein: 106-285
Range on HMM: 1-200/200
Sequence Identity: 28% (58 aa)

DIYIVAN-DDNQ-EMVLKLHRLGRVSFKTIKNNRDYLKH----RKSASWLYLSRLAALKEFAYMKALYENGFPVPTPIDYNRHCIVMS---RARGYPLTQ
..| ..   |.. |...|..|.|. .|| .|  ||| ..    .   .|.|..|..| |||...|..|| |.|.| |||.|||..||.   ...|.|. .
NVYHAYSMEDGKDECAVKIYRTGTTCFKKMKRYRDYDFRFRHRYHHHNWRYMVRMWAEKEFRNLKRMYEAGVPCPKPIDWNRHVLVMEFIGDKDGWPAPR

IVQLR--------HPSKVYSDLMN--LIVKLASYGLIHGDFNEFNILINDEEEITLIDFPQMVSTSHLNAEMYFDRDVTCIRVFFEKRFNFI-GERWPKF
. ..          .. .| ...   ......  ||.|||..|.|||. |......||.||.|...| .|.....||...|  ||....  .  .  ...
LKDVEMELELSEEEAEEIYDEIIREYMRRMYQECGLVHGDLSEYNILVHDDGKPWIIDWPQAVEHDHPHALEFLERDCRNIINFFRRKGVDERVMDFREI





RIO Rio2.AA RIO 64-287 22 2.4e-52 181.11 SMART 1-253 (253) Show / Hide
Range on Protein: 64-287
Range on HMM: 1-253/253
Sequence Identity: 22% (57 aa)

DGRNYDGYKLTYLGYDFLALKTLVSRGVCSYVG--NQIGVGKESDIYIV----ANDDNQEMVLKLHRLGRVSFKTIKNNRD-YLKHR---KSASWLYLSR
| ..|..| ... ... ..|...| ||. . ..  ..|..|||...| .    . ..  |.. | .|... .||....... . . .     ..|....|
DKEDYATYEEVFDPRTRMTLYKMVNRGYIEEINNHGCISTGKEANVYHAMGGDFDKNGNECAVKIYRTSTTEFKRMWRYIQGDFRFKHGYHHINWRKMVR

LAALKEFAYMKALYENGFPVPTPIDYNRHCIVMS--RARGYPLTQIVQLRHPS-------KVYSDLMNLIVKLASYG-LIHGDFNEFNILIN-----DEE
|.| |||  .. .|| |.|.|.||...|| .||.   ..|.|  .   .   .       ..|...|  ..|..  . |.|.|..|.|.|.      ...
LWAEKEFRNLQRMYEAGVPCPKPIAWRRHVLVMEFIGDDGWPAPRLKDVEWEEWEMDFKWEYYWQIMEYMRKMYHECHLVHADLSEYNMLYHDLEDENDC

EITLIDFPQMVSTSHLNAEMYFDRDVTCIRVFFEKRF--NF--IGERWPKFKD
.. .||..| |...|  .. .. ||...|. ||...   ..    | . ....
KVWIIDWSQSVECDHPMWLEFLERDIWNIINFFRRKGVDCDDIYREIFERITG

Rio2_N Rio2.AA Rio2_N 8-89 55 2.2e-51 175.76 Pfam 1-84 (84) Show / Hide
Range on Protein: 8-89
Range on HMM: 1-84/84
Sequence Identity: 55% (47 aa)

LRYLSKDDFRTLVAVEMGMKNHELVPVSLICTIANLK-YGGTKKSIQTLHKFKLLFH-DGRNYDGYKLTYLGYDFLALKTLVSR
.|||||.|||.| ||||||.|||.||..||..|..|.  ||...... |.|.||. | ..  ||||.|||.|||.|||.|.|.|
MRYLSKEDFRVLTAVEMGMRNHEWVPTELIHQISRLRSHGGCHYRLSRLCKHKLISHVQNKKYDGYRLTYGGYDYLALHTFVKR

Kinase Rio2.AA Ciliate-C3 217-245 48 4.3e-07 21.79 In-house 112-140 (140) Show / Hide
Range on Protein: 217-245
Range on HMM: 112-140/140
Sequence Identity: 48% (14 aa)

LASYGLIHGDFNEFNILINDEEEITLIDF
|  . ..|||    ||||| ..|| .|||
LHEHNIVHGDIKFSNILINSKDEIKIIDF

Kinase Rio2.AA APH 95-219 13 0.000198 15.99 Pfam 1-112 (248) Show / Hide
Range on Protein: 95-219
Range on HMM: 1-112/248
Sequence Identity: 13% (18 aa)

VGNQIGVGKESDIYIVANDDNQ-EMVLKLHRLGRVSFKTIKNNRDYLKHRKSASWLYLSRLAALKEFAYMKALYENGF--PVPTPID-------YNRHCI
 . .|. | ... | . .|| . ..||..                   ....      .. .. .|.. ...| ..|.  ||| ...       . ..  
WWRPISGGWSNRTYYRTTDD-RPRYVLRR-------------------YPPP-----WWAEELHREHRWLRHLAAHGIPVPVPRVLWGCTDDEFHGWPWY

VMSRARGYPLTQ-I-VQLRHPSKVYSDLMNLIVKLAS
.|..  | .|..    . ... ... .|  ....| .
LMEWLPGEDLWRWHALHCAQRPALLEALARFLARLHQ

Kinase Rio2.AA APH 221-245 27 0.007422 10.62 Pfam 171-199 (248) Show / Hide
Range on Protein: 221-245
Range on HMM: 171-199/248
Sequence Identity: 27% (8 aa)

GLIHGDFNEFNILIN---DEEEI-TLIDF
...||||.  |....   |....  .||.
CWCHGDFHPGNVMWDPRPDGGRVTGVIDW