Gene n596 (Tetrahymena)

n596

Species: Tetrahymena
Alias: 3691.m00090, n596, 596
External Links:
Annotation:

Classification

Group: Atypical
Family: PI3
Subfamily: PI4

Sequence

Name Sequence Type Origin Length Description Download
n596.AA Protein None 768 None Fasta, JSON
n596.NA RNA None 2307 None Fasta, JSON

Protein domain

Protein domains of n596.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.

Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking.

Show/hide domain list
Domain Protein name Domain Name Range Identity (%) Significance Score Profile Source Profile Range (length) Alignment
UBQ n596.AA UBQ 19-96 24 4e-06 27.72 SMART 1-72 (72) Show / Hide 
Range on Protein: 19-96
Range on HMM: 1-72/72
Sequence Identity: 24% (19 aa)

KHVNIKDQYT-EELIVRIPVHQCMSISTIKQKIQQKIGGVNGGIGKIRLRYKQQLLQNNNASIADYNIKNESTLYYSPV
 .. .|.|.  ..  ....  .  ..|..||.|..| |      ...||.|. . |...  ..|||||...||..    
MQIFVKWQNGWKTFTFEVKPSD-WTVSELKQHIEDKEGI---PPEQQRLIYQGK-LEDD--TLADYNIQPGSTIHLMVR
PI3_PI4_kinase n596.AA PI3_PI4_kinase 141-331 16 5.2e-28 104.17 Pfam 1-205 (300) Show / Hide 
Range on Protein: 141-331
Range on HMM: 1-205/300
Sequence Identity: 16% (37 aa)

GI-----SGSYFL--ENVDR-NNVAIFKPLDEEPYAPNNPKGYVGKLGQRGIRSGIRSGEQGYRE----VVAYILDPE--------------GFHGVPAT
..     .|....        . ...|||.|||||| ||| .  ....| ..  .. ... . |.    . .|...|               .||..| |
WYPFIFKGGDDLRCRQDMRMMQMICVFKPKDEEPYA-NNP-N-KWTMWQHRLMNKCWKKDGCDRRRNMQMQPYRCIPTGPWCGMIEWVPNCTTFHEIPRT

T-----FVEFYHPSFKYNQSQLTNQQKEDHNIKRPSFIDVDKANFQQILSDFNQDQIKRGSLQVFVKNTEEC-GNYG-NSIFSIDEVHKIAILDIRILNC
.     .  |... ..  .... . ...             . . ... . .   . |.|..|.|.|. ... ....    . . ........|... |.
YMVKCKHKHFNKEHKMWMKMWPDWWHLM-------------RMQKVEVFEMRIMKTPKPGLYQWFWKHNPDAYEEWWEARDNFVRSCAGMCVVDYILGNG

DRNDQNILVKKKKKKKEDIKFLPI
||.  ||.||  . .|.. .  .|
DRHNDNIMVK--D-DKTTGHLFHI
PI3_PI4_kinase n596.AA PI3_PI4_kinase 388-488 14 4.723948 1.89 Pfam 192-300 (300) Show / Hide 
Range on Protein: 388-488
Range on HMM: 192-300/300
Sequence Identity: 14% (16 aa)

LL---EYDFQLIPIDHGLSLS-------DSFDICQDDLNWMWWEQSEQQFSEKSLQYIEQIQIEQDLKILQNQFN-LREECLKCFRIANIVLKKGAQSGL
..   . . .|..||.|...        . .. .  .  | .| |.  ....  ..||      .|   ..     . . . .. ..  ..|||..  |.
MVKDDKTTGHLFHIDFGHCFPHWKMKHFHKPERV--PFRWTHWPQAKKPMVHAMGGYI-SLDPSGDYGWFRDYCWHAYRALRRHMNLCMNLLKKAVMRGE

TIKEIGNILYRE
.  ..| .  |.
CMVHDGLPMWRS