CC1G_06337

Species: C.cinerea
Alias: CC1G_06337
External Links:
Annotation:

Classification

Group: Atypical
Family: Alpha
Subfamily: Alpha-Unclassified

Sequence

Name Sequence Type Origin Length Description Download
CC1G_06337.AA Protein None 119 None Fasta, JSON
CC1G_06337.NA RNA None 360 None Fasta, JSON
CC1G_06337.kin_dom Protein Kinase Domain None 60 None Fasta, JSON

Protein domain

Protein domains of CC1G_06337.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.

Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking.

Domain Protein name Domain Name Range Identity (%) Significance Score Profile Source Profile Range (length) Alignment
Kinase CC1G_06337.AA Alpha 17-50 29 6e-06 12.82 In-house 175-215 (215) Show / Hide
Range on Protein: 17-50
Range on HMM: 175-215/215
Sequence Identity: 29% (12 aa)

DVVIHS-----DDESYGLGGQGTSGLEELAARH--QCNNIC
|. ||.      .. .| |  | .|.   .. |  ||| .|
DPQIHCPAKLDQGMKFGDGNCGYEGMFRFFYTHHVQCNHYC

Kinase CC1G_06337.AA Alpha-Unclassified 17-50 26 1.4e-05 14.03 In-house 178-215 (215) Show / Hide
Range on Protein: 17-50
Range on HMM: 178-215/215
Sequence Identity: 26% (10 aa)

DVVIHSDDESYG--LGGQGTSGLEELAARH--QCNNIC
|. ||. .  |.   .  |  ..   .. |  ||| .|
DPQIHTIRQRYQGFKTNCGMRFIDYWFNNHHVQCNHYC

Alpha_kinase CC1G_06337.AA Alpha_kinase 17-50 36 2.9e-05 19.36 Pfam 185-225 (225) Show / Hide
Range on Protein: 17-50
Range on HMM: 185-225/225
Sequence Identity: 36% (15 aa)

DVVIHSDDESY------GLGGQGTSGLEELAA-RHQCNNIC
| .||. |  |      |.| .|  | |   . .|.||.||
DPQIHTKDGNYEMDFDEGMGNLGQEGIEKFFQNQHKCNHIC

Kinase CC1G_06337.AA VWL 44-55 58 0.000167 9.44 In-house 195-206 (206) Show / Hide
Range on Protein: 44-55
Range on HMM: 195-206/206
Sequence Identity: 58% (7 aa)

HQCNNICKALGL
|||| .|. | |
HQCNKYCQKLQL