Gene CC1G_13652 (C.cinerea)

CC1G_13652

Species: C.cinerea
Alias: CC1G_13652
External Links:
Annotation:

Classification

Group: Atypical
Family: RIO
Subfamily: RIO2

Sequence

Name Sequence Type Origin Length Description Download
CC1G_13652.AA Protein None 472 None Fasta, JSON
CC1G_13652.NA RNA None 1419 None Fasta, JSON
CC1G_13652.kin_dom Protein Kinase Domain None 244 None Fasta, JSON

Protein domain

Protein domains of CC1G_13652.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.

Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking.

Show/hide domain list
Domain Protein name Domain Name Range Identity (%) Significance Score Profile Source Profile Range (length) Alignment
Kinase CC1G_13652.AA RIO2 72-315 51 3.4e-143 482.03 In-house 1-260 (260) Show / Hide 
Range on Protein: 72-315
Range on HMM: 1-260/260
Sequence Identity: 51% (136 aa)

YRLTYGGYDYLAMRALSKRDSMTSVGNQIGVGKESDIYVVANAEGDEMVLKLHRLGRISFRSIKTKRDYMGKRKSASWMYLSRLSAQKEYAFMKVLYEHG
||||  ||||||.. || |  . |||||.||||||||| ..| .|. ...|.||||| ||..|| .|||. .| ..|||||||||| |||.||..||. .
YRLTNAGYDYLALKTLSSRQVVYSVGNQMGVGKESDIYKCSNENGNQFIMKFHRLGRTSFHNIKNNRDYHKHRHQYSWMYLSRLSAMKEYQFMDMLYKRN

FPIPKPIDQARHCVLMEFINAYPLRQISEVPSPGKLYSTLMDLIVRFAQAGLIHGDFNEFNILIREETGE------PVVIDFPQMVSTSHENAEWYFNRD
||.|||||. || | || || ||..||...  | ..|. .| .||| |  ||||.||||||..| .. ..       ..|||||||||.| ||.||| ||
FPVPKPIDYNRHIVVMELINGYPMCQIHHHDNPPYVYDQCMCFIVRLANHGLIHCDFNEFNLMI-DDNDHDENDCGFIMIDFPQMVSTQHQNAQWYFDRD

VECIRTFFRRRFRYESNLYPRFKRTMAEGSADGNDF-------------RLDVIVEASGFSKN
|.||. ||..|| ||. ..|    |  ||  ||  .              ||. | ||||.| 
VDCIHRFFMKRFNYEPKPFPSMLDT--EGFGDGYKYAYPDFFRDIQRTDTLDEEVQASGFNKK
Kinase CC1G_13652.AA RIO 72-288 39 5.70000000001e-105 355.03 In-house 1-245 (276) Show / Hide 
Range on Protein: 72-288
Range on HMM: 1-245/276
Sequence Identity: 39% (97 aa)

YRLTYGGYDYLAMRALSKRDSMTSVGNQIGVGKESDIYVVANAEGD-----------EMVLKLHRLGRISFRSIKTKRD---YMGKRKS-ASWMYLSRLS
|..|  .|....|  .. |   .||||.|||||||||| ..|..|.           | ..|.||.|| ||...| .||   |  .| . ..|.|..||.
YEQTNDPYTRMIMYKMVNRGMVESVGNCIGVGKESDIYHCSNENGEDEKEDSKVIPTECAIKIHRTGRTSFKDRKKYRDGEFYFKHRHCKHNWRYMHRLW

AQKEYAFMKVLYEHGFPIPKPIDQARHCVLMEFINA-------YPLRQISEVPSPGKLYSTLMDLIVRFAQAG-LIHGDFNEFNILIREETGE------P
| ||...|| ||. ||| |.|||. || . |||||        ||..||.|.  . ..|...| ...| .| . |.|.||||||... .. ..       
AEKEMRNMKRLYQSGFPCPEPIDYKRHVLVMEFINHDQMPAPKYPMCQIHEHENMKHVYHQCMCYMRRLYQHCRLVHCDFNEFNMMWHDG-KHDENDCGF

VVIDFPQMVSTSHENAEWYFNRDVECIRTFFRRRFRYESNLYPRFK
..|||||||...| .|.||| ||..|.. || .|| ||. . . ..
YMIDFPQMVEHDHPHALWYFRRDCKCVNMFFMKRFVYEPFPEREMF
Kinase CC1G_13652.AA RIO1 107-287 30 4.9e-71 221.99 Pfam 1-200 (200) Show / Hide 
Range on Protein: 107-287
Range on HMM: 1-200/200
Sequence Identity: 30% (62 aa)

DIYVVAN-AEGD-EMVLKLHRLGRISFRSIKTKRDYMGK----RKSASWMYLSRLSAQKEYAFMKVLYEHGFPIPKPIDQARHCVLMEFIN---AYPLRQ
..|...   .|. |...|..|.|. .|. .| .|||       .   .| |..|..| ||....| .||.|.|.|||||  ||...||||     .|. .
NVYHAYSMEDGKDECAVKIYRTGTTCFKKMKRYRDYDFRFRHRYHHHNWRYMVRMWAEKEFRNLKRMYEAGVPCPKPIDWNRHVLVMEFIGDKDGWPAPR

ISEVP--------SPGKLYSTLMD--LIVRFAQAGLIHGDFNEFNILIREETGEPVVIDFPQMVSTSHENAEWYFNRDVECIRTFFRRRFRYE-SNLYPR
. .|.         .  .|  ...  .... . .||.|||..|.|||. .. |.|..||.||.|...|..|.... ||...| .||||.. .| .  .. 
LKDVEMELELSEEEAEEIYDEIIREYMRRMYQECGLVHGDLSEYNILVHDD-GKPWIIDWPQAVEHDHPHALEFLERDCRNIINFFRRKGVDERVMDFRE

F
.
I
RIO CC1G_13652.AA RIO 65-289 22 8.9e-68 232.39 SMART 1-253 (253) Show / Hide 
Range on Protein: 65-289
Range on HMM: 1-253/253
Sequence Identity: 22% (58 aa)

QNAKYEGYRLTYGGYDYLAMRALSKRDSMTSVG--NQIGVGKESDIYVV----ANAEGDEMVLKLHRLGRISFRSIKTKRDYMGKRK----SASWMYLSR
 ...| .|............... .|.  ....  ..|..|||...|..    .  .|.|.. | .|... .|....  ...  . |     ..|....|
DKEDYATYEEVFDPRTRMTLYKMVNRGYIEEINNHGCISTGKEANVYHAMGGDFDKNGNECAVKIYRTSTTEFKRMWRYIQGDFRFKHGYHHINWRKMVR

LSAQKEYAFMKVLYEHGFPIPKPIDQARHCVLMEFINA--YPLRQISEVPSPG-------KLYSTLMDLIVRFAQAG-LIHGDFNEFNILIR----EETG
|.| ||. ... .||.|.| ||||.  || ..|||| .  .| .. ..|..         ..|...|. ...... . |.|.|..|.|.|.     |. .
LWAEKEFRNLQRMYEAGVPCPKPIAWRRHVLVMEFIGDDGWPAPRLKDVEWEEWEMDFKWEYYWQIMEYMRKMYHECHLVHADLSEYNMLYHDLEDENDC

EPVVIDFPQMVSTSHENAEWYFNRDVECIRTFFRRRFRYES----NLYPRFKR
....||..| |...|. .. .. ||...|..||||. ...      .. |.. 
KVWIIDWSQSVECDHPMWLEFLERDIWNIINFFRRKGVDCDDIYREIFERITG
Rio2_N CC1G_13652.AA Rio2_N 8-90 63 2.2e-53 182.49 Pfam 1-84 (84) Show / Hide 
Range on Protein: 8-90
Range on HMM: 1-84/84
Sequence Identity: 63% (53 aa)

LRYVTSEEFRVLTAVEMGSKNHEIVPTHLIVQISGLR-GGGVNKLIGSLAKRNLISKVQNAKYEGYRLTYGGYDYLAMRALSKR
.|| ..|.||||||||||..|||.|||.|| |||.|| .||...... |.|..|||.|||.||.||||||||||||| ....||
MRYLSKEDFRVLTAVEMGMRNHEWVPTELIHQISRLRSHGGCHYRLSRLCKHKLISHVQNKKYDGYRLTYGGYDYLALHTFVKR
Kinase CC1G_13652.AA APH 96-221 14 2.8e-05 18.91 Pfam 1-113 (248) Show / Hide 
Range on Protein: 96-221
Range on HMM: 1-113/248
Sequence Identity: 14% (20 aa)

VGNQIGVGKESDIYVVANAEGDEMVLKLHRLGRISFRSIKTKRDYMGKRKSASWMYLSR---LSAQKEYAFMKVLYEHGF--PIPKPID-------QARH
 . .|. | ... | . . .....||..                           | ..    ....|......| .||.  |.|....       . ..
WWRPISGGWSNRTYYRTTDDRPRYVLRR---------------------------YPPPWWAEELHREHRWLRHLAAHGIPVPVPRVLWGCTDDEFHGWP

CVLMEFINAYPLRQISE---VPSPGKLYSTLMDLIVRFAQA
  |||.. . .|..  .    . ...|.  | ....|. |.
WYLMEWLPGEDLWRW-HALHCAQRPALLEALARFLARLHQV
Kinase CC1G_13652.AA APH 222-247 34 0.000337 15.2 Pfam 171-199 (248) Show / Hide 
Range on Protein: 222-247
Range on HMM: 171-199/248
Sequence Identity: 34% (10 aa)

GLIHGDFNEFNILIR-EETGEPV--VIDF
...||||.  |....  ..|..|  |||.
CWCHGDFHPGNVMWDPRPDGGRVTGVIDW