Col4A3BP

Species: Human
Alias: Col4A3BP
External Links:
Annotation:

Classification

Group: Atypical
Family: Col4A3BP

Sequence

Name Sequence Type Origin Length Description Download
Col4A3BP.AA Protein None 624 None Fasta, JSON
Col4A3BP.NA RNA None 5395 None Fasta, JSON

Protein domain

Protein domains of Col4A3BP.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.

Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking.

Domain Protein name Domain Name Range Identity (%) Significance Score Profile Source Profile Range (length) Alignment
PH Col4A3BP.AA PH 24-119 28 4.1e-23 84.02 SMART 1-82 (82) Show / Hide
Range on Protein: 24-119
Range on HMM: 1-82/82
Sequence Identity: 28% (27 aa)

VERCGVLSKWTNYIHGWQDRWVVLKNNALSYYKSEDETEYGCRGSICLSKAVITPHDFDECRFDISVNDSVWYLRAQDPDHRQQWIDAIEQHKTES
|...| |.|..    .|..||.||.|. |.|||..      ..||| ||.. ... .     | |.  | ..|... .....|.|..||...  ..
VIKEGWLYKKS--K-RWKKRWFVLFNDCLYYYKDK-----KPKGSIPLSDCTVRE-P----CFEIHH-DRTYYFQCESEEEMQEWMQAIQKAIHNN

PH Col4A3BP.AA PH 24-117 30 1.8e-22 83.65 Pfam 1-92 (92) Show / Hide
Range on Protein: 24-117
Range on HMM: 1-92/92
Sequence Identity: 30% (30 aa)

VERCGVLSKWTNYIHGWQDRWVVLKNNALSYYKSEDETEYGCRGSICLSKAVITPHDF--DECRFDISVNDS-VWYLRAQDPDHRQQWIDAIEQHKT
|...| |.|.. .. .|..||.||.|| |.|||...   | ..||| ||.. .|...   ... | |.  |  ..|..| .......|..||...  
VIKEGWLHKKG-KRKSWKKRWFVLFNNCLYYYKDDK---YRPKGSIPLSDCQVTKVPDNKRPHCFQIRT-DRRTYYFQAESEEEMNDWMQAIQSACR

START Col4A3BP.AA START 398-619 14 1.2e-21 79.18 SMART 1-248 (248) Show / Hide
Range on Protein: 398-619
Range on HMM: 1-248/248
Sequence Identity: 14% (38 aa)

EEMVQNHMTYSLQDVGGDANWQLVV----EEGEMKVYRREVEENG------IVLDPLKATHAVKGVTGHEVCNYFWNVDV-RNDWETTIE----NFHVVE
| .. . .   ..   ....| |..    .| .|........            ....| ..|  ..  ..   ....   |. | ....     . |||
EYWCECCCEFVQMACEDYKGWVLMYETREIENYMEYRYIWEDGCNCMQGLRFHGYMMRAWGVVPMCCAFDLVEEVMMDMEYRMEWDCNFCCMVSFAEVVE

TLADN------AIIIYQTHKRVW--PASQ-RDVLYLSVIRKIPALTE-NDPETWIVCNFSVDHDSAPL---NNRCVRAKINVAMIC-QTLVSPPEGNQEI
.. ..      ..|....|....  | .  ||....  .|.       .. . |..|  ||.|.. |    . ..||... . ..| ...  ...     
VICPGHGPNRNTVIYHWVHNMMMPMPMWPTRDFVFVRYWRRDCDH-RFDRDGSWVICCRSVTHPQHPPTGPHSGYVRCHHYPSGCCIWPCGNGHTK----

SRDNILCKITYVANVNPGGWAP--ASVLRAVAKREYPKFLKR--FTSYVQEKTAG
  |   ||.|.. .....|| |    ..|.. ......|.|.  .. ..|. .. 
--DDNRCKVTWICHADLKGWLPFVHWYIRWFMHHCMAEFWKHRDWMATLQKWCWK

START Col4A3BP.AA START 398-619 14 2.1e-19 73.12 Pfam 1-236 (236) Show / Hide
Range on Protein: 398-619
Range on HMM: 1-236/236
Sequence Identity: 14% (35 aa)

EEMVQNHMTYSLQDVGGDANWQLVV-----EEGEMKVYRREVEENG----IVLDPLKATHAVKGVTGHEVCNYFWNVD-VRNDWETTIE----NFHVVET
| .  . .   ..  .....| ...     .| ....|..... ..       ....| ..|  ..   . . ....   .  | ....       ....
EVWEEAMQEFVKMACSDEPGWVKMPETGRDMENYDEYYQKFEPSQVTKPGCHGEMSRAWGVVPMCHAFDLVEEVMHDMEYMMQWDQMFRCMVSRAETIQH

LADN------AIIIYQTHKRVW--PASQ-RDVLYLSVIRKIPALTEN-DPETWIVCNFSVDHDSAPL--NNRCVRAKINVAMICQTLVSPP-EGNQEISR
. ..      ..| .. .. .|  | .  ||..... .|..     .   ..|..|  ||||.. |   .  .||..  ....| . .. . .       
ICPGNGGNYNGDIQHMVAEMQWPTPHVPTRDFVFVRYWRQV----CDHRDGDWVICDRSVDHPQCPPEGHKGYVRCHHLPSGCCIWPCGNGHT-------

DNILCKITYVANVNPGGWAP-ASVLRAVAKREYPKFLKRFTSYVQEKTAG
    ||.|.| .....|| |  .|.| . ......|.|.... .|. .. 
---KCKVTWVCHWDLKGWLPVHWVYRWLYHSCMAFFWKHWVATLQRHCER