Gene DhkB (Slime mold)

DhkB

Species: Slime mold
Alias: DDB0215358, DdisK265, DhkB
External Links: DictyBase Link ,
Annotation:

Classification

Group: Atypical
Family: HisK

Sequence

Name Sequence Type Origin Length Description Download
DhkB.AA Protein None 1969 None Fasta, JSON
DhkB.kin_dom Protein Kinase Domain None 8 None Fasta, JSON

Protein domain

Protein domains of DhkB.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.

Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking.

Show/hide domain list
Domain Protein name Domain Name Range Identity (%) Significance Score Profile Source Profile Range (length) Alignment
HisKA DhkB.AA HisKA 960-1025 34 2e-23 85.06 SMART 1-89 (89) Show / Hide 
Range on Protein: 960-1025
Range on HMM: 1-89/89
Sequence Identity: 34% (31 aa)

AKVIFLTTVSHELRTPINGVLASADILER----------TTLDSTQ-------------KEFLNCIKLSGNYLLDLINDILDYSKIEAG
||  || ..|||||||...... |..|..          |.||. |             .|.|. |. .......||||.||.|.||||
AKRQFLANMSHELRTPLTAIRGYAELLQDWYYKQRYHHWTDLDPEQRLPMLRREFNCEYREYLETIQREADRMQRLINDLLDLSRIEAG
HisKA DhkB.AA HisKA 960-1025 44 2e-23 84.62 Pfam 1-69 (69) Show / Hide 
Range on Protein: 960-1025
Range on HMM: 1-69/69
Sequence Identity: 44% (31 aa)

AKVIFLTTVSHELRTPINGVLASADILER-TTLDSTQ--KEFLNCIKLSGNYLLDLINDILDYSKIEAG
||  || ..|||||||...... |..|.. |.||. |  .|.|. |. .......||||.||.|.||||
AKRQFLANMSHELRTPLTAIRGYAELLQDYTDLDPEQMRREYLETIQREAQRMQRLINDLLDFSRIEAG
Kinase DhkB.AA HisK 1072-1187 29 1.7e-42 147.54 In-house 1-164 (164) Show / Hide 
Range on Protein: 1072-1187
Range on HMM: 1-164/164
Sequence Identity: 29% (48 aa)

GDQRRIKQILLNFLSNSIKFTNHG------QIIIRVKLESDDST----------------------HSLIKFDVEDSGIGIKTEHLNQLFASFSQID---
 |..||||||.|..||..|||..|      .| | |.. ....                         ||...|.|.|.|.. | ....|  |..||   
SDPNRIKQILINLISNALKFTQKGGIPFQGYIKIKVEQINTQNNIKYNSIFIQKIQENMVQEQLQQKNLIQISVQDTGCGMPEEQQKKIFKMFGNIDDQH

-------SGNSR--KYQGTGLGLSISKRLCKMMG--------GDVKVKSEFGVGSTFSFTIPCG
       . ..   . .| ||||.|...| |..|        .  .|.|| |.|||||| | . 
QMIKKTFNHQNKKNNQHGCGLGLTICNNLAKGLGPEHNQNGNRGIQVQSEVGKGSTFSFYIYNN
Kinase DhkB.AA HATPase_c 1072-1188 31 1.1e-39 139.14 SMART 1-130 (130) Show / Hide 
Range on Protein: 1072-1188
Range on HMM: 1-130/130
Sequence Identity: 31% (47 aa)

GDQRRIKQILLNFLSNSIKFTNH--------------GQIIIRVKLESDDSTHSLIKFDVEDSGIGIKT------EHLNQLFASFSQIDS--------GN
||..|..|.|.| |.|.||.| .              |.| .||.            . |||.|.||        |.....|  | . |.        ..
GDPDRLRQVLWNLLDNAIKHTPEGHADPDLHDGKPGGGRITVRVH-----------RITVEDNGPGIPPEMHKSIEDIPRIFEPFYRTDDSPSRMCPDSR

SRKYQG--TGLGLSISKRLCKMMGGDVKVKSEFGVGSTFSFTIPCGI
||||.|  |||||||.||.....||...|       .||.||.|  .
SRKYGGGLTGLGLSICKRIVEQHGGTIWVE------TTFTFTLPLER
Kinase DhkB.AA HATPase_c 1072-1187 36 8.5e-39 137.25 Pfam 1-120 (120) Show / Hide 
Range on Protein: 1072-1187
Range on HMM: 1-120/120
Sequence Identity: 36% (46 aa)

GDQRRIKQILLNFLSNSIKFTNH-GQIIIRVKLESDDSTHSLIKFDVEDSGIGIKT------EHLNQLFASFSQIDS-GNSRKYQG--TGLGLSISKRLC
||..|..|...|...|.||.|   |.| .||. .        . . |||.|.||        |.....|  | . |. .. |||.|  |||||.|..|..
GDPDRLHQVVWNLVDNAIKHTPEGGHITVRVHRDD-----DHVRITVEDNGPGIPPEMHSIAEDIPRIFEPFYRTDPDSR-RKYGGGLTGLGLYICRRIV

KMMGGDVKVKSEFGVGSTFSFTIPCG
...||.. | || | |.||.||.|  
EQHGGTIWVESEPGGGTTFTFTLPLE
REC DhkB.AA REC 1839-1964 23 1.8e-35 125.05 SMART 1-150 (150) Show / Hide 
Range on Protein: 1839-1964
Range on HMM: 1-150/150
Sequence Identity: 23% (40 aa)

EKILLVEDN----FVNVKIFS------KLLKDSGYI--------FDVAHNGV-------EAVECVKKGA-------------YDLILMDCQMP-------
 .||.|.|.     |. .. .      .||.. ||          |.| .|        ||.| ....              .|||.||..||       
MRILIVDDDPAMAPVIREMLRNYTVIQRLLEKEGYENKMWMVEVVDEA-DGETLMNEIWEALELLQEHRDKKEDATTDQSEPPDLIIMDIMMPGDPFEDG

EMDGFEATTAIRELEKSNLIESPPSKKHSHVVIVALTANSGYKDKQKCLSVGMNDFLQKPIKTSDILIQMI
.|||.|.. .||                    |..|||...  |....| .|..|.. ||..    |.. |
GMDGIELCRRIR-------------------PIIMLTAHDDEEDRVRALEAGADDYITKPFDPE-ELLARI
Response_reg DhkB.AA Response_reg 1841-1965 28 2e-31 115.1 Pfam 1-115 (115) Show / Hide 
Range on Protein: 1841-1965
Range on HMM: 1-115/115
Sequence Identity: 28% (37 aa)

ILLVEDNFVNVKIFSKLLK-DSGY-IFDVAHNGVEAVECVKKGAYDLILMDCQMPEMDGFEATTAI-RELE-KSNLIESPPSKKHSHVVIVALTANSGYK
.|.|.|. .. ... ..|. ..|| . ..| .| ||.|..... .|||.||..||.|||.|... | |...  .             . |...||..   
VLIVDDHPLMREGLRQILEQKEGYEVVAEADDGEEALEWWQEHHPDLIIMDINMPGMDGLELCRRIRRQHPHPQ-------------TPIIMCTAHGDED

DKQKCLSVGMNDFLQKPIKTSDILIQMIK
|....| .|.||.. ||.   | |...|.
DAVEALQAGANDYITKPF-DPDELHAAIR