Gene 15306 (Tetrahymena)

15306

Species: Tetrahymena
Alias: 3809.m00220, PreTt15306, 15306, TTHERM_01055520, 250, 215.m00049
External Links: Tetrahymena Genome Database (TGD)
Annotation:

Classification

Group: Atypical
Family: HisK

Sequence

Name Sequence Type Origin Length Description Download
15306.AA Protein None 1171 None Fasta, JSON
15306.kin_dom Protein Kinase Domain None 77 None Fasta, JSON
15306.NA RNA None 3516 None Fasta, JSON

Protein domain

Protein domains of 15306.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.

Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking.

Show/hide domain list
Domain Protein name Domain Name Range Identity (%) Significance Score Profile Source Profile Range (length) Alignment
HisKA 15306.AA HisKA 76-140 15 0.000905 10.37 SMART 1-89 (89) Show / Hide 
Range on Protein: 76-140
Range on HMM: 1-89/89
Sequence Identity: 15% (14 aa)

KLLHYIPSLIHDLRNPLQQLVACIELYKQ-----------QLNQMQ-------------NPLYEILLHSVTHMNELITKSLTTFKKITE
 .   . .. |.||.||  . . .|| .             |.  |               . |...... .|..||   |.  .  ..
AKRQFLANMSHELRTPLTAIRGYAELLQDWYYKQRYHHWTDLDPEQRLPMLRREFNCEYREYLETIQREADRMQRLINDLLDLSRIEAG
Kinase 15306.AA HisK 201-236 25 0.000108 13.57 In-house 8-71 (164) Show / Hide 
Range on Protein: 201-236
Range on HMM: 8-71/164
Sequence Identity: 25% (16 aa)

QVIQNLFSNATKFTEKG------SIKLIVS--------------FHEMPED--------DNIYC
|.. || ||| |||.||      .||..|.                . .|.        .|...
QILINLISNALKFTQKGGIPFQGYIKIKVEQINTQNNIKYNSIFIQKIQENMVQEQLQQKNLIQ
HATPase_c 15306.AA HATPase_c 194-224 34 0.016855 10.94 Pfam 1-32 (120) Show / Hide 
Range on Protein: 194-224
Range on HMM: 1-32/120
Sequence Identity: 34% (11 aa)

IPKLEVTQVIQNLFSNATKFTEK-GSIKLIVS
   . . ||..|| .|| |.|.. | |.. |.
GDPDRLHQVVWNLVDNAIKHTPEGGHITVRVH
Kinase 15306.AA HisK 806-885 27 1.1e-20 71.21 In-house 65-164 (164) Show / Hide 
Range on Protein: 806-885
Range on HMM: 65-164/164
Sequence Identity: 27% (27 aa)

KIQGYLKFEILDTGKGMDENEQKKIFDIYQ------------QANNSIKEHYGGSGIGLYSAKNIANQLN--------GDIFCHSQKGVGSAFIFYMPCT
. ...... . ||| ||.|..|||||....            . ....| .  | |.||. ..|.| .|         . |   |..|.|| |.||. ..
QQKNLIQISVQDTGCGMPEEQQKKIFKMFGNIDDQHQMIKKTFNHQNKKNNQHGCGLGLTICNNLAKGLGPEHNQNGNRGIQVQSEVGKGSTFSFYIYNN
Kinase 15306.AA HATPase_c 809-885 26 9e-19 67.56 Pfam 36-120 (120) Show / Hide 
Range on Protein: 809-885
Range on HMM: 36-120/120
Sequence Identity: 26% (23 aa)

GYLKFEILDTGKGMDE------NEQKKIFDIYQQANN-SIKEHYGG--SGIGLYSAKNIANQLNGDIFCHSQKGVGSAFIFYMPCT
... ... |.|.|...       .. .||. .... . |  . |||  .|.||| .. |. |..|.| ..|. | |. |.|. | .
DHVRITVEDNGPGIPPEMHSIAEDIPRIFEPFYRTDPDSR-RKYGGGLTGLGLYICRRIVEQHGGTIWVESEPGGGTTFTFTLPLE
HATPase_c 15306.AA HATPase_c 781-886 17 4.3e-09 37.45 SMART 1-130 (130) Show / Hide 
Range on Protein: 781-886
Range on HMM: 1-130/130
Sequence Identity: 17% (24 aa)

QIHPSIRDLVFN--RNNIRNFQI-------------RQVAKIQGYLKFEILDTGKGMDE------NEQKKIFDIYQQANN--------SIKEHYGG--SG
     .| .. |   | |.  .                  ..  .  ... |.|.|...       ....||. .... .        |    |||  .|
GDPDRLRQVLWNLLDNAIKHTPEGHADPDLHDGKPGGGRITVRVH-RITVEDNGPGIPPEMHKSIEDIPRIFEPFYRTDDSPSRMCPDSRSRKYGGGLTG

IGLYSAKNIANQLNGDIFCHSQKGVGSAFIFYMPCTA
.||. .|.|..|..|.| .       . |.|. | ..
LGLSICKRIVEQHGGTIWVE------TTFTFTLPLER
REC 15306.AA REC 1029-1144 13 5.9e-10 40.32 SMART 1-150 (150) Show / Hide 
Range on Protein: 1029-1144
Range on HMM: 1-150/150
Sequence Identity: 13% (21 aa)

IRVIYIDDS----QFLLQAME------KMLSKIKCV-------ELIIEQNPL-------KALQIIKQNP-----------QKFDIALIDHEMP-------
.|.  .||.    . ......      ..|.|  .        . ..  .          ||.......           ...|. ..| .||       
MRILIVDDDPAMAPVIREMLRNYTVIQRLLEKEGYENKMWMVEVVDEA-DGETLMNEIWEALELLQEHRDKKEDATTDQSEPPDLIIMDIMMPGDPFEDG

ELNGKKLASEIKLINSSIKLICHSGYDATSEFTQECIQSGFSYFLQKPSYLENIVVLF
...|  |. .|.      . |  ...| . |  ......|   .. ||  .| ..   
GMDGIELCRRIR------PIIMLTAHD-DEEDRVRALEAGADDYITKPFDPEELLARI
Response_reg 15306.AA Response_reg 1031-1145 16 1e-08 33.83 Pfam 1-115 (115) Show / Hide 
Range on Protein: 1031-1145
Range on HMM: 1-115/115
Sequence Identity: 16% (20 aa)

VIYIDDSQFLLQAMEKMLS-KIKCVELIIEQNPLKALQIIKQNPQKFDIALIDHEMPELNGKKLASEI-KLIN-SSIKLICHSGYDATSEFTQECIQSGF
|. .||.. ..... ..|  |  . .    ...  ||......   .|. ..|..||...|  |...| .  . .... |  ....   .  .|..| | 
VLIVDDHPLMREGLRQILEQKEGYEVVAEADDGEEALEWWQEHH--PDLIIMDINMPGMDGLELCRRIRRQHPHPQTPIIMCTAHGD-EDDAVEALQAGA

SYFLQKPSYLENIVVLFC
 ... ||. .. ..    
NDYITKPFDPDELHAAIR