Gene 17177 (Tetrahymena)

17177

Species: Tetrahymena
Alias: PreTt17177, 191.m00037, 17177, 277, 3761.m00231, TTHERM_01002570
External Links: Tetrahymena Genome Database (TGD)
Annotation:

Classification

Group: Atypical
Family: HisK

Sequence

Name Sequence Type Origin Length Description Download
17177.AA Protein None 1013 None Fasta, JSON
17177.kin_dom Protein Kinase Domain None 124 None Fasta, JSON
17177.NA RNA None 3042 None Fasta, JSON

Protein domain

Protein domains of 17177.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.

Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking.

Show/hide domain list
Domain Protein name Domain Name Range Identity (%) Significance Score Profile Source Profile Range (length) Alignment
Kinase 17177.AA HisK 568-691 31 1e-39 138.23 In-house 1-164 (164) Show / Hide 
Range on Protein: 568-691
Range on HMM: 1-164/164
Sequence Identity: 31% (52 aa)

SDLSKVRQILINLLTNALKNTQKG------NICISLSQPF--------------------------KNFIQVDVKDSGEGIPSDELIQMFQNLYQSTQQH
|| ....||||||..|||| ||||      .|.|...|                            || ||..|.|.| |.| ... . |... . ..||
SDPNRIKQILINLISNALKFTQKGGIPFQGYIKIKVEQINTQNNIKYNSIFIQKIQENMVQEQLQQKNLIQISVQDTGCGMPEEQQKKIFKMFGNIDDQH

IN---MRKDKQQDFYHDSNMSQGLKICYLLSICLG------QNRPLTASSEVAKGSIFTFYIKNT
 .   . ...|. ... .    || ||. |  .||      .||...  ||| |||.|.||| |.
-QMIKKTFNHQNKKNNQHGCGLGLTICNNLAKGLGPEHNQNGNRGIQVQSEVGKGSTFSFYIYNN
Kinase 17177.AA HATPase_c 568-691 21 2.6e-12 45.06 Pfam 1-120 (120) Show / Hide 
Range on Protein: 568-691
Range on HMM: 1-120/120
Sequence Identity: 21% (29 aa)

SDLSKVRQILINLLTNALKNTQK-GNICISLSQPFKNFIQVDVKDSGEGIPS------DELIQMFQNLYQSTQQHINMRKDKQQDFYHDSN--MSQGLKI
 |   ..|.. ||..||.| |.. | | .....   . ... |.|.| |||       ... ..|.  |.. ..          . .  .   .  || |
GDPDRLHQVVWNLVDNAIKHTPEGGHITVRVHRDD-DHVRITVEDNGPGIPPEMHSIAEDIPRIFEPFYRTDPD---------SR-RKYGGGLTGLGLYI

CYLLSI-CLGQNRPLTASSEVAKGSIFTFYIKNT
|. ..    |.   ....||. .|. |||... .
CRRIVEQHGGT---IWVESEPGGGTTFTFTLPLE
Kinase 17177.AA HATPase_c 568-692 20 2.5e-10 41.55 SMART 1-130 (130) Show / Hide 
Range on Protein: 568-692
Range on HMM: 1-130/130
Sequence Identity: 20% (30 aa)

SDLSKVRQILINLLTNALKNTQK--------------GNICISLSQPFKNFIQVDVKDSGEGIPS------DELIQMFQNLYQSTQQHINMRKDKQQDFY
 |   .||.|.|||.||.| |..              | | ....       .. |.|.| |||       ... ..|.  |.  ...   |.. ... .
GDPDRLRQVLWNLLDNAIKHTPEGHADPDLHDGKPGGGRITVRVH-------RITVEDNGPGIPPEMHKSIEDIPRIFEPFYRTDDSPS--RMCPDSRSR

HDSN--MSQGLKICYLLSICLGQNRPLTASSEVAKGSIFTFYIKNTK
  .   .  || ||  ..  .|    ....      . |||... ..
KYGGGLTGLGLSICKRIVEQHGGT--IWVE------TTFTFTLPLER