Gene HisK_p (S.moellendorffii)

HisK_p

Species: S.moellendorffii
Alias: HisK_p
External Links:
Annotation:

Classification

Group: Atypical
Family: HisK

Sequence

Name Sequence Type Origin Length Description Download
HisK_p.AA Protein None 606 None Fasta, JSON
HisK_p.NA RNA None 1821 None Fasta, JSON

Protein domain

Protein domains of HisK_p.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.

Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking.

Show/hide domain list
Domain Protein name Domain Name Range Identity (%) Significance Score Profile Source Profile Range (length) Alignment
GAF HisK_p.AA GAF 158-317 16 2.1e-10 38.83 Pfam 1-160 (160) Show / Hide 
Range on Protein: 158-317
Range on HMM: 1-160/160
Sequence Identity: 16% (30 aa)

VKHTILNTTLVELGKTLGLEECCL--WMPNRSGTELELFRSLRSPNA--VATSVPVHHPDIKLVFGANRAVVIPSSSPVAIHVLTAAGNASARSSC----
  ..|| |.. ||...||.. |..  ... ..|.||.. ..  ..     |  .|  .. .  ||   ...|    ..|. . . . . ...        
DLEEILQTIMQELRQLLGCDRCMIYFFLWDEDGWELYWVAHWGWSDQPQQAR-LPM-GGIWGEVFCTCNPIV---VPDVC-DPRFR-WPCVDEDRPEHHH

---------RYAPGEVLAVRVPFLHLN---DFRVGDWSQAHGHRPFALMVLVLPPNSA-RRWRPHELD--MVDAVADQVAVAM
         .. .  .|.| .  .. .   .                . ||..  . . |.| .|.|.  .. ..|||.|.|.
CHCHYMRHMHHGIRSCLCVPIFDIIGQPGQQ---------------VWGVLCCHHC-PPRHWTEHDLECFLLQMFADQIAIAI
GAF HisK_p.AA GAF 158-327 14 8.6e-05 13.3 SMART 1-142 (142) Show / Hide 
Range on Protein: 158-327
Range on HMM: 1-142/142
Sequence Identity: 14% (26 aa)

VKHTILNTTLVELGKTLGLEECCLWMPNR-----SGTELELFRSLRSPNAVATSVPVHHPDIKLVFGANRAVVIPSSSPVAIHVLTAAGNASARSSCRYA
  ..|..|.. |....|... | ... ..     .........         .  |.  . .. |.  .| |.|| ...        . .  ..   || 
DLEEICQTIVEEVHQFLQMDRCMIYLFDERQNDHGQLWCHASD---------HFPPD--GICGWVWRTGRPVNIPDVHHDP------HFFCWKDWL-RYQ

PGEVLAVRVPFLHLNDFRVGDWSQAHGHRPFALMVLVLPPN-SARRWRPHELDMVDAVADQVAVAMSHASILEDSI
..  |.| .                       ..||..    ..|.| ..... . ..|.|||.| ..| ..| . 
IRSFLCVPIMND----------------DGQVWGVLCAHHCHQPRHWTEEDEEFLQMIANQVAIAIQQAQLYEQLQ
HisKA HisK_p.AA HisKA 353-418 33 3.5e-15 55.89 Pfam 1-69 (69) Show / Hide 
Range on Protein: 353-418
Range on HMM: 1-69/69
Sequence Identity: 33% (23 aa)

ARNNFMAVMNQEMRTPMNSIIDLTHRLEE-TNMTQDQ--RALVDTILRNSTLLAKLVNSVLDLSRLEDD
|.. |.| |  |.|||...|. ... |.. |... .|  | ...||.| .  . .|.| .||.||.|  
AKRQFLANMSHELRTPLTAIRGYAELLQDYTDLDPEQMRREYLETIQREAQRMQRLINDLLDFSRIEAG
HisKA HisK_p.AA HisKA 353-418 26 4.2e-15 57.42 SMART 1-89 (89) Show / Hide 
Range on Protein: 353-418
Range on HMM: 1-89/89
Sequence Identity: 26% (24 aa)

ARNNFMAVMNQEMRTPMNSIIDLTHRLEE----------TNMTQDQ-------------RALVDTILRNSTLLAKLVNSVLDLSRLEDD
|...|.| |  |.|||...|. ... |..          |... .|             | ...||.| .  . .|.| .|||||.|  
AKRQFLANMSHELRTPLTAIRGYAELLQDWYYKQRYHHWTDLDPEQRLPMLRREFNCEYREYLETIQREADRMQRLINDLLDLSRIEAG
HATPase_c HisK_p.AA HATPase_c 465-585 30 1.9e-22 80.37 Pfam 1-120 (120) Show / Hide 
Range on Protein: 465-585
Range on HMM: 1-120/120
Sequence Identity: 30% (40 aa)

GDDRRLVQVLLQITGNAVKFTKE-GSVSTSVRLEKGVNGSNDHHCYIRVQVRDTGQGFLP------QDIPKHFNRGGMILDAKNIKHYSG----TGLPIS
|| .||.||.. . .||.|.|.| | .. .|. ..          ..|..|.|.| |. |      .|||. | ...   .. .   |.|     || |.
GDPDRLHQVVWNLVDNAIKHTPEGGHITVRVHRDD---------DHVRITVEDNGPGIPPEMHSIAEDIPRIFEPFYRTDPDSR-RKYGGGLTGLGLYIC

KRWLVNLMEGHIWIESDGPGKGSVVTFIVKLQ
.| .| ...|.||.||   |.|...|| ..|.
RR-IVEQHGGTIWVESEP-GGGTTFTFTLPLE
HATPase_c HisK_p.AA HATPase_c 465-586 26 6.8e-19 70.02 SMART 1-130 (130) Show / Hide 
Range on Protein: 465-586
Range on HMM: 1-130/130
Sequence Identity: 26% (41 aa)

GDDRRLVQVLLQITGNAVKFTKE--------------GSVSTSVRLEKGVNGSNDHHCYIRVQVRDTGQGFLP------QDIPKHFNRGGMILD------
|| .|| |||. . .||.|.|.|              | .. .|.               |..|.|.| |. |      .|||. | ...   |      
GDPDRLRQVLWNLLDNAIKHTPEGHADPDLHDGKPGGGRITVRVH---------------RITVEDNGPGIPPEMHKSIEDIPRIFEPFYRTDDSPSRMC

-AKNIKHYSG----TGLPISKRWLVNLMEGHIWIESDGPGKGSVVTFIVKLQR
 . .   |.|     ||.|.|| .|....|.||.|       ...|| ..|.|
PDSRSRKYGGGLTGLGLSICKR-IVEQHGGTIWVE-------TTFTFTLPLER
Kinase HisK_p.AA HisK 465-520 23 4.8e-08 25.65 In-house 1-80 (164) Show / Hide 
Range on Protein: 465-520
Range on HMM: 1-80/164
Sequence Identity: 23% (19 aa)

GDDRRLVQVLLQITGNAVKFTKEGS--VSTSVRLE----------KGVNGS----NDHHC----------YIRVQVRDTGQG
 | .|. |.|. . .||.|||..|    . .....          |  | |    ..             .|...| ||| |
SDPNRIKQILINLISNALKFTQKGGIPFQGYIKIKVEQINTQNNIKY-N-SIFIQKIQENMVQEQLQQKNLIQISVQDTGCG
Kinase HisK_p.AA HisK 572-585 35 0.39916 0.7 In-house 151-164 (164) Show / Hide 
Range on Protein: 572-585
Range on HMM: 151-164/164
Sequence Identity: 35% (5 aa)

PGKGSVVTFIVKLQ
.||||  .| .  .
VGKGSTFSFYIYNN