Cdk9_Dmel YEKVAKIGQGTFGE-----------VFKAREKKGNKKFVAMKKVLMDNEKEGFPITALRE
CDK9_Mmus YEKLAKIGQGTFGE-----------VFKAKHRQT-GQKVALKKVLMENEKEGFPITALRE
H25P06.2_Cele YEKLNKIGQGTFGQVLQGRKSRNSEVFKARCKNT-GRMVALKKILMENEKEGFPITALRE
CDK9_Hsap YEKLAKIGQGTFGE-----------VFKARHRKT-GQKVALKKVLMENEKEGFPITALRE
CDK9_Spur YDKLAKIGQGTFGE-----------VFKAKHKKN-KNIVALKKVLMENEKEGFPITALRE
SGV1_Scer YREDEKLGQGTFGE-----------VYKGIHLET-QRQVAMKKIIVSVEKDLFPITAQRE
CC1G_11325_Ccin YEVTTKLGEGTFGE-----------VHKAIQKAT-GASVALKRILMHHEKEGMPVTALRE
AqueK100_Aque ------------------------------------------------------------
AqueK101_Aque YEKLTKVGQGTFGE-----------VFKAKDRKT-GRLVALKKVCMENEKEGFPMTALRE
Cdk9_Dmel IRILQLLKHENVVNLIEICRTKATAT-----NGYRSTFYLVFDFCEHDLAGLLSNMNVKF
CDK9_Mmus IKILQLLKHENVVNLIEICRTKASPY-----NRCKGSIYLVFDFCEHDLAGLLSNVLVKF
H25P06.2_Cele VKMLEQLKHPNITDLIEVCSAKSTGT---TGSKDRATFYLVMALCAHDLAGLLSNPKIRM
CDK9_Hsap IKILQLLKHENVVNLIEICRTKASPY-----NRCKGSIYLVFDFCEHDLAGLLSNVLVKF
CDK9_Spur IRILQLLRHENVVPLYEICRTKATAY-----NRYKGSIYLVFEFCEHDLAGLLSNTNVKF
SGV1_Scer ITILKRLNHKNIIKLIEMVYDHSPDITNAASSNLHKSFYMILPYMVADLSGVLHNPRINL
CC1G_11325_Ccin IKILKALKHPCIVNILDMFVVRSSE-------KDPLSVYMVFPYMDHDLAGLLENERVKL
AqueK100_Aque -------------------------Y-----NRDKGSIYLVLDFCEHDLAGLLECKEIKF
AqueK101_Aque IRILQLLQHNNIVNLVEICRSKATPY-----NRDKGSIYLVLDFCEHDLAGLLECKEIKF
:.*::: **:*:* :.:
Cdk9_Dmel SLGEIKKVMQQLLNGLYYIHSNKILHRDMKAANVLITKHGILKLADFGLARAFS------
CDK9_Mmus TLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFS------
H25P06.2_Cele SLVHIKTMMKHLMSGLNKLHRSKILHRDMKAANVLISKDGILKLADFGLARPFV------
CDK9_Hsap TLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFS------
CDK9_Spur SLGEIKSVIKQLLNGLYYIHSNKVLHRDMKAANILITKAGVLKLADFGLARAFS------
SGV1_Scer EMCDIKNMMLQILEGLNYIHCAKFMHRDIKTANILIDHNGVLKLADFGLARLYYGCPPNL
CC1G_11325_Ccin QPSQIKLYMKQLLEGTEYMHRNHILHRDMKAANLLISNTGNLRIADFGLARSFDTN----
AqueK100_Aque SLSEIKNIMQQLFNALAYIHGNNILHRDMKSCNILVTRKGELKLADFGLARALN------
AqueK101_Aque SLSEIKNIMQQLFNALAYIHGNNILHRDMKSCNILVTRKGELKLADFGLARALN------
.** : ::.. :* :.:***:*:.*:*: . * *::*******
Cdk9_Dmel -IPKN--ESKNRYTNRVVTLWYRPPELLLGDRNYGPPVDMWGAGCIMAEMWTRSPIMQGN
CDK9_Mmus -LAKN--SQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGN
H25P06.2_Cele -QRENGAGPRPLYTNRVVTLWYRPPELLLGDRQYGTKIDVWGAGCIMAEMWTRQPIMQGD
CDK9_Hsap -LAKN--SQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGN
CDK9_Spur -LPKG--DAPNRYTNRVVTLWYRPPELLLGERNYGPAIDLWGAGCIMAEMWTRSPIMQGN
SGV1_Scer KYPG-GAGSGAKYTSVVVTRWYRAPELVLGDKQYTTAVDIWGVGCVFAEFFEKKPILQGK
CC1G_11325_Ccin -ITKG--GSTRKYTNCVVTRWYRPPELLLGARQYGGEVDIWGIGCVLGEMFNRRPILPGS
AqueK100_Aque -K-----GTNQRYTNRVVTLWYRPPELFLGERNYGPPIDMWGAGCIMAEMWTRRPIMQGD
AqueK101_Aque -K-----GANQRYTNRVVTLWYRPPELFLGERNYGPPIDMWGAGCIMAEMWTRRPIMQGD
**. *** ***.***.** ::* :*:** **::.*:: : **: *.
Cdk9_Dmel TEQQQLTFISQLCGSFTPDVWPGVEELELYKSIE------LPK-NQKRRVKERLRPY---
CDK9_Mmus TEQHQLALISQLCGSITPEVWPNVDKYELFEKLE------LVK-GQKRKVKDRLKAY---
H25P06.2_Cele TEQKQLQLISGLCGSINKDVWPNCVNMPLWSAMSSEPNSALPQ-GKYRILPNKMKNLMKF
CDK9_Hsap TEQHQLALISQLCGSITPEVWPNVDNYELYEKLE------LVK-GQKRKVKDRLKAY---
CDK9_Spur TEQHQLTLISHLCGSITSAVWPGLEKLELSNTLE------LPK-GHKRKVKDRLRSY---
SGV1_Scer TDIDQGHVIFKLLGTPTEEDWAVARYLPG---AE------LTTTNYKPTLRERFGKY---
CC1G_11325_Ccin SDLDQLEKIWYLCGTPTQHSWPNFDALPGCDGVK------HFKSNHIRRVKMTYES----
AqueK100_Aque TEQKQITLICQLCGSISPTEWAGVEKLEYYQKLE------LPQ-KENRKLKERLRHF---
AqueK101_Aque TEQKQITLICQLCGSISPTEWAGVEKLEYYQKLE------LPQ-KENRKLKERLRHF---
:: .* * * *: . *. . :
Cdk9_Dmel -------------------VKDQTGCDLLDKLLTLDPKKRIDADTALNHDFF
CDK9_Mmus -------------------VRDPYALDLIDKLLVLDPAQRIDSDDALNHDFF
H25P06.2_Cele DAPDSKTDPFGKNVKQHDSATDDDALHLLEILLAIDPDKRPTSDEAEDDIWF
CDK9_Hsap -------------------VRDPYALDLIDKLLVLDPAQRIDSDDALNHDFF
CDK9_Spur -------------------VKDQQALDLIDKLLNIDPKRRMDAAIALDHDFF
SGV1_Scer -------------------LSE-TGLDFLGQLLALDPYKRLTAMSAKHHPWF
CC1G_11325_Ccin --------------------VGAETADLLDKLLVCNPKERITAAQALEHEYF
AqueK100_Aque -------------------VEDPYALDLIDKLLMLDPRKRIDADSTLEHDFF
AqueK101_Aque -------------------VEDPYALDLIDKLLMLDPRKRIDADSTLEHDFF
.:: ** :* .* : : .. :*